RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 RCE1Q9Y256 329 aa16.95■□□□□ 0.3
DDX39A-214ENST00000590556 HCFC1P51610 2035 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 ICE1Q9Y2F5 2266 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 ALPK2Q86TB3 2170 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 PRSS44E7EML9 344 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 PTP4A3O75365 173 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 GASTP01350 101 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 IFNGR1P15260 489 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 GSSP48637 474 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 SELENOPP49908 381 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 ARHGDIAP52565 204 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 PRPS1P60891 318 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 TSPAN31Q12999 210 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 FHL1Q13642 323 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 TAF11Q15544 211 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 UBE2J2Q8N2K1 259 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 AQP11Q8NBQ7 271 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 LRTOMTQ8WZ04 291 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 PSMG3-AS1Q96PY0 264 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 BDH2Q9BUT1 245 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 EMC6Q9BV81 110 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 NTN4Q9HB63 628 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 GALNT8Q9NY28 637 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 ELOVL5Q9NYP7 299 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 PDP1Q9P0J1 537 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-214ENST00000590556 FOXD3Q9UJU5 478 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-214ENST00000590556 MGAT4BQ9UQ53 548 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 SIGLEC7Q9Y286 467 aa16.94■□□□□ 0.3
DDX39A-214ENST00000590556 SLC35F4A4IF30 521 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 ZNF726A6NNF4 738 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 BCL10O95999 233 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 IGHV3-9P01782 118 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 POU2F1P14859 743 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 RPL4P36578 427 aaKnown RBP16.93■□□□□ 0.3
DDX39A-214ENST00000590556 BIDP55957 195 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 FBXW9Q5XUX1 488 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 AMIGO2Q86SJ2 522 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 OR2M2Q96R28 347 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 SLCO5A1Q9H2Y9 848 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 UPB1Q9UBR1 384 aa16.93■□□□□ 0.3
DDX39A-214ENST00000590556 UTP20O75691 2785 aaKnown RBP16.92■□□□□ 0.3
DDX39A-214ENST00000590556 ARRDC5A6NEK1 342 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 OR6C65A6NJZ3 312 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 MCIDASD6RGH6 385 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 H3BNX3 289 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 SLC43A1O75387 559 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 KRT33AO76009 404 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 ZNF432O94892 652 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 NDUFB2O95178 105 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 CNOT4O95628 575 aaKnown RBP16.92■□□□□ 0.3
DDX39A-214ENST00000590556 GRNP28799 593 aaKnown RBP16.92■□□□□ 0.3
DDX39A-214ENST00000590556 CD79BP40259 229 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 DAP3P51398 398 aaKnown RBP16.92■□□□□ 0.3
DDX39A-214ENST00000590556 CTXN1P60606 82 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 ACKR1Q16570 336 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 TSPO2Q5TGU0 170 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 CARD17Q5XLA6 110 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 SHQ1Q6PI26 577 aaKnown RBP16.92■□□□□ 0.3
DDX39A-214ENST00000590556 Q6ZT83 130 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 IGFN1Q86VF2 1251 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 KIF18BQ86Y91 864 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 GABRG1Q8N1C3 465 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 LRRC75AQ8NAA5 344 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 POMGNT2Q8NAT1 580 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 OR5K1Q8NHB7 308 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 FANK1Q8TC84 345 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 GTPBP3Q969Y2 492 aaKnown RBP16.92■□□□□ 0.3
DDX39A-214ENST00000590556 NRBF2Q96F24 287 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 ADAD1Q96M93 576 aaKnown RBP16.92■□□□□ 0.3
DDX39A-214ENST00000590556 FEVQ99581 238 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 DGCR6LQ9BY27 220 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 TXNIPQ9H3M7 391 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 S100A14Q9HCY8 104 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 NPDC1Q9NQX5 325 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-214ENST00000590556 SLC7A10Q9NS82 523 aa16.92■□□□□ 0.3
DDX39A-214ENST00000590556 C19orf84I3L1E1 186 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 ADAP00813 363 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 ZNF26P17031 533 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-214ENST00000590556 FAM27E3Q08E93 113 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 FAPQ12884 760 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 TOP3AQ13472 1001 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-214ENST00000590556 CAMK2DQ13557 499 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 MELKQ14680 651 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 P2RY6Q15077 328 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 SMARCD3Q6STE5 483 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 HS3ST5Q8IZT8 346 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 TMEM123Q8N131 208 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 OR6X1Q8NH79 312 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 STMN2Q93045 179 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 CENPNQ96H22 339 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-214ENST00000590556 ASB6Q9NWX5 421 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 MALT1Q9UDY8 824 aa16.91■□□□□ 0.3
DDX39A-214ENST00000590556 NPIPB13A6NJU9 1138 aa16.9■□□□□ 0.3
DDX39A-214ENST00000590556 NPIPB4C9JG80 1138 aa16.9■□□□□ 0.3
DDX39A-214ENST00000590556 GSTM3P21266 225 aa16.9■□□□□ 0.3
DDX39A-214ENST00000590556 PRKACGP22612 351 aa16.9■□□□□ 0.3
DDX39A-214ENST00000590556 PCYT1AP49585 367 aa16.9■□□□□ 0.3
DDX39A-214ENST00000590556 ERVK-25P63136 954 aa16.9■□□□□ 0.3
DDX39A-214ENST00000590556 LGALS3BPQ08380 585 aa16.9■□□□□ 0.3
DDX39A-214ENST00000590556 HMBOX1Q6NT76 420 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms