RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 NME4O00746 187 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 HPRP00739 348 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 TNFRSF1BP20333 461 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 PTNP21246 168 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 GTF2E2P29084 291 aaKnown RBP9.83□□□□□ -0.84
SMAD4-211ENST00000590499 MPGP29372 298 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 PRDX6P30041 224 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 KDELR2P33947 212 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 SLC7A2P52569 658 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 GNGT1P63211 74 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 LIPEQ05469 1076 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 LGALS3BPQ08380 585 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 STK11Q15831 433 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 MS4A18Q3C1V0 323 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 CYBRD1Q53TN4 286 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 ADAM5Q6NVV9 412 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 H1FNTQ75WM6 255 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-211ENST00000590499 LINGO2Q7L985 606 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 CARM1Q86X55 608 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 C17orf78Q8N4C9 275 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 WDR31Q8NA23 367 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 LILRB1Q8NHL6 650 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-211ENST00000590499 PROX1Q92786 737 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 MPP4Q96JB8 637 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 PIP5K1AQ99755 562 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 HOPXQ9BPY8 73 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-211ENST00000590499 FAM107BQ9H098 131 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 NSRP1Q9H0G5 558 aaKnown RBP9.83□□□□□ -0.84
SMAD4-211ENST00000590499 UBTD1Q9HAC8 227 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 EFCAB1Q9HAE3 211 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 NGBQ9NPG2 151 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 BEX4Q9NWD9 120 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-211ENST00000590499 MRPL39Q9NYK5 338 aaKnown RBP9.83□□□□□ -0.84
SMAD4-211ENST00000590499 ABCD2Q9UBJ2 740 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 UPB1Q9UBR1 384 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 BAG5Q9UL15 447 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 SLC7A7Q9UM01 511 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 SH3GLB1Q9Y371 365 aa9.83□□□□□ -0.84
SMAD4-211ENST00000590499 ZANQ9Y493 2812 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 CIB4A0PJX0 185 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 OR6C65A6NJZ3 312 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 HS3ST1O14792 307 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 EIF4EBP3O60516 100 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-211ENST00000590499 UPK3AO75631 287 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 IFNA14P01570 189 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 ZNF43P17038 809 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 CBLP22681 906 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 NUDT2P50583 147 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 CLDN17P56750 224 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 SLC25A3Q00325 362 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 BSPH1Q075Z2 132 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 ZNF74Q16587 644 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 LRRC23Q53EV4 343 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-211ENST00000590499 C1QTNF12Q5T7M4 302 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 C9orf135Q5VTT2 229 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 OR7E24Q6IFN5 339 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 NIPAL3Q6P499 406 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 PIGWQ7Z7B1 504 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 TMEM123Q8N131 208 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 ZNF611Q8N823 705 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 MUCL1Q96DR8 90 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 CMTM5Q96DZ9 223 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 ALKBH3Q96Q83 286 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-211ENST00000590499 LINC00470Q9BZP3 86 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 SLC19A3Q9BZV2 496 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 POLR2J2Q9GZM3 115 aaKnown RBP9.82□□□□□ -0.84
SMAD4-211ENST00000590499 POLR2J3Q9H1A7 115 aaKnown RBP9.82□□□□□ -0.84
SMAD4-211ENST00000590499 ESRP2Q9H6T0 727 aaKnown RBP9.82□□□□□ -0.84
SMAD4-211ENST00000590499 SLC17A5Q9NRA2 495 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 RNF115Q9Y4L5 304 aa9.82□□□□□ -0.84
SMAD4-211ENST00000590499 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-211ENST00000590499 SHISA9B4DS77 424 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 PLPP3O14495 311 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 DYNC1I1O14576 645 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 OR5F1O95221 314 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 MT-ATP6P00846 226 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 CD3EP07766 207 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 HLA-DOBP13765 273 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 HOXC12P31275 282 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 OR1E2P47887 323 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 GSK3BP49841 420 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 SELENOWP63302 87 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 TGFBR3Q03167 851 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 CPLX4Q7Z7G2 160 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 TGIF2LYQ8IUE0 185 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 WDFY1Q8IWB7 410 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 KBTBD8Q8NFY9 601 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 OR52N5Q8NH56 324 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 AKAP1Q92667 903 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMAD4-211ENST00000590499 NEUROG1Q92886 237 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 PIGTQ969N2 578 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 OR2M2Q96R28 347 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 CCL19Q99731 98 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 ASPNQ9BXN1 380 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 NELFAQ9H3P2 528 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 FKRPQ9H9S5 495 aa9.81□□□□□ -0.84
SMAD4-211ENST00000590499 MEPEQ9NQ76 525 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-211ENST00000590499 A0A1W2PR80 420 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 ZNF587BE7ETH6 402 aa9.8□□□□□ -0.84
SMAD4-211ENST00000590499 RPL36A-HNRNPH2H7BZ11 118 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms