RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 PTDSS1P48651 473 aaKnown RBP11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 COPZ1P61923 177 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 TEKQ02763 1124 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 BAMBIQ13145 260 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 C1DQ13901 141 aaKnown RBP11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 TMEM154Q6P9G4 183 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 RETREG3Q86VR2 466 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 NOA1Q8NC60 698 aaKnown RBP11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 MGARPQ8TDB4 240 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 POP5Q969H6 163 aaKnown RBP11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 TUBGCP3Q96CW5 907 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 OR2M2Q96R28 347 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 PTDSS2Q9BVG9 487 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 DENND2DQ9H6A0 471 aaPredicted RBP11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 HINT3Q9NQE9 182 aaKnown RBP11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 NKIRAS2Q9NYR9 191 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 ZNF224Q9NZL3 707 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 ZNF69Q9UC07 566 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 SLC7A8Q9UHI5 535 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 NUP50Q9UKX7 468 aa11.92□□□□□ -0.5
CROCCP3-204ENST00000590118 CDHR4A6H8M9 788 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 CLDN25C9JDP6 229 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 CLDN34H7C241 214 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 CLPTM1O96005 669 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 MDKP21741 143 aaPredicted RBP11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 RPS5P46782 204 aaKnown RBP11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 GIPRP48546 466 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 RAB1AP62820 205 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 LCN2P80188 198 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 EMX2Q04743 252 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 EGR4Q05215 589 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 MAD2L1Q13257 205 aaPredicted RBP11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 CHI3L2Q15782 390 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 PCGF3Q3KNV8 242 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 ANXA8L1Q5VT79 327 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 RGS7BPQ6MZT1 257 aaPredicted RBP11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 LEG1Q6P5S2 330 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 ZNF813Q6ZN06 617 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 USP51Q70EK9 711 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 ZNF627Q7L945 461 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 RNF130Q86XS8 419 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 WDFY1Q8IWB7 410 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 PEX5LQ8IYB4 626 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 BCL6BQ8N143 479 aaPredicted RBP11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 VPS37AQ8NEZ2 397 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 SLC25A28Q96A46 364 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 TIMD4Q96H15 378 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 C16orf45Q96MC5 204 aaPredicted RBP11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 ZNF48Q96MX3 618 aaPredicted RBP11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 TSPAN32Q96QS1 320 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 PKP2Q99959 881 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 SLC35A5Q9BS91 424 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 ASIC5Q9NY37 505 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 PLEK2Q9NYT0 353 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 NOP53Q9NZM5 478 aaKnown RBP11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 GPR160Q9UJ42 338 aa11.91□□□□□ -0.5
CROCCP3-204ENST00000590118 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 PPIAL4EA0A075B759 164 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 PPIAL4CA0A0B4J2A2 164 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 PPIAL4DF5H284 164 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 TRAF3IP2O43734 574 aaPredicted RBP11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 AKAP8O43823 692 aaKnown RBP11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 FZD7O75084 574 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 RAB36O95755 333 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 PPIAL4FP0DN26 164 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 B4GALT1P15291 398 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 GTF2E2P29084 291 aaKnown RBP11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 ALDH3A1P30838 453 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 ATP4BP51164 291 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 AQP5P55064 265 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 SELENOVP59797 346 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 CASP8Q14790 479 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 RAB39AQ14964 217 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 MFSD13AQ14CX5 517 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 ARMCX4Q5H9R4 360 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 ATG16L1Q676U5 607 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 ZNF836Q6ZNA1 936 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 VRK2Q86Y07 508 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 C20orf196Q8IYI0 205 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 DEFB108BQ8NET1 73 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 SNX33Q8WV41 574 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 RAB1CQ92928 201 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 KTI12Q96EK9 354 aaPredicted RBP11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 GAL3ST1Q99999 423 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 POFUT2Q9Y2G5 429 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 MMP24Q9Y5R2 645 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 CACNG2Q9Y698 323 aa11.9□□□□□ -0.5
CROCCP3-204ENST00000590118 LOC102725191A0A1B0GVB3 256 aa11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 AIM2O14862 343 aa11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 NR2F1P10589 423 aa11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 PRG2P13727 222 aa11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 ZNF250P15622 560 aa11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 KRT4P19013 534 aa11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 NCF2P19878 526 aaPredicted RBP11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 ARRB2P32121 409 aa11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 LSP1P33241 339 aa11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 KLF3P57682 345 aaPredicted RBP11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 SRSF4Q08170 494 aaKnown RBP11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 SLC9A3R2Q15599 337 aa11.89□□□□□ -0.51
CROCCP3-204ENST00000590118 HFEQ30201 348 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms