RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CHMP1AQ9HD42 196 aaPredicted RBP13.33□□□□□ -0.28
RETREG3-208ENST00000589797 ELK1P19419 428 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 TCN2P20062 427 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 PPICP45877 212 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 C21orf58P58505 322 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 EFR3AQ14156 821 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ACKR1Q16570 336 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 NAT6Q93015 286 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 SPACA5Q96QH8 159 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ANKRD19PQ9H560 264 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ZNF701Q9NV72 531 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 SIGLEC7Q9Y286 467 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 OR2J2O76002 312 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 SPNP16150 400 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 HSF2Q03933 536 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 OXA1LQ15070 435 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 DPY19L2P2Q6ZN68 376 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 OR2T35Q8NGX2 323 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 NDUFB11Q9NX14 153 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 PLEK2Q9NYT0 353 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 B3GNT3Q9Y2A9 372 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ZNF281Q9Y2X9 895 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 MPIG6BO95866 241 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 TBX6O95947 436 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 CASRP41180 1078 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 PSPHP78330 225 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 CDK5Q00535 292 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 C1orf140Q5VVS0 124 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 PYHIN1Q6K0P9 492 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 LINC00696Q6ZRV3 163 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 PNLDC1Q8NA58 520 aaKnown RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ZNF578Q96N58 590 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 FYTTD1Q96QD9 318 aaKnown RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 SEMA4CQ9C0C4 833 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 GSKIPQ9P0R6 139 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ABI3Q9P2A4 366 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 TCF20Q9UGU0 1960 aaKnown RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ZFHX2Q9C0A1 2572 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 TRDV1A0A1B0GX56 115 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 DSCR3O14972 297 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ECDO95905 644 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 GNG2P59768 71 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 CD163Q86VB7 1156 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ANKRD9Q96BM1 317 aaPredicted RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ARHGDIGQ99819 225 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 ARHGAP9Q9BRR9 750 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 MOV10Q9HCE1 1003 aaKnown RBP13.32□□□□□ -0.28
RETREG3-208ENST00000589797 AKIP1Q9NQ31 210 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 CES1P1Q9UKY3 287 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 SLC22A13Q9Y226 551 aa13.32□□□□□ -0.28
RETREG3-208ENST00000589797 AKAP6Q13023 2319 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 IGHV1OR21-1A0A087WYE8 117 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 PATE3B3GLJ2 98 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 CYR61O00622 381 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 ARPC1BO15143 372 aaKnown RBP13.31□□□□□ -0.28
RETREG3-208ENST00000589797 GATBO75879 557 aaKnown RBP13.31□□□□□ -0.28
RETREG3-208ENST00000589797 ZGLP1P0C6A0 271 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 DNASE1P24855 282 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 CCL7P80098 99 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 GALEQ14376 348 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 TOMM34Q15785 309 aaPredicted RBP13.31□□□□□ -0.28
RETREG3-208ENST00000589797 SLC22A6Q4U2R8 563 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 QSOX2Q6ZRP7 698 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 MORN4Q8NDC4 146 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 STRADBQ9C0K7 418 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 ZNF224Q9NZL3 707 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 MGAT4CQ9UBM8 478 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 CGGBP1Q9UFW8 167 aaPredicted RBP13.31□□□□□ -0.28
RETREG3-208ENST00000589797 PCNX1Q96RV3 2341 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 CACNA1DQ01668 2161 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 C17orf51A8MQB3 221 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 SYPP08247 313 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 POU3F3P20264 500 aaPredicted RBP13.31□□□□□ -0.28
RETREG3-208ENST00000589797 LTBRP36941 435 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 FUT5Q11128 374 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 FGFBP1Q14512 234 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 RAB11BQ15907 218 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 PRTGQ2VWP7 1150 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 HLA-BQ31612 363 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 FAM205BPQ63HN1 556 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 RPL22L1Q6P5R6 122 aaKnown RBP13.31□□□□□ -0.28
RETREG3-208ENST00000589797 TSEN54Q7Z6J9 526 aaKnown RBP13.31□□□□□ -0.28
RETREG3-208ENST00000589797 POGLUT1Q8NBL1 392 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 OR13C9Q8NGT0 318 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 DERL3Q96Q80 235 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 PRDM6Q9NQX0 595 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 IMPA2O14732 288 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 NKX2-2O95096 273 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 PIPP12273 146 aaPredicted RBP13.31□□□□□ -0.28
RETREG3-208ENST00000589797 CRABP1P29762 137 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 FOLR3P41439 243 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 CD226Q15762 336 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 SLC25A35Q3KQZ1 300 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 FAAP20Q6NZ36 180 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 ACBD4Q8NC06 268 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 OR52N1Q8NH53 320 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 MOGAT1Q96PD6 335 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 VN1R1Q9GZP7 353 aa13.31□□□□□ -0.28
RETREG3-208ENST00000589797 NEUROG3Q9Y4Z2 214 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms