RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	ZFAND5	O76080	213 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	JMJD7	P0C870	316 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	ICAM2	P13598	275 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	FBXW4	P57775	412 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	FHL1	Q13642	323 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	OCLN	Q16625	522 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC25A30	Q5SVS4	291 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	LUZP2	Q86TE4	346 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	ATG4D	Q86TL0	474 aa	Predicted RBP	14	□□□□□ -0.17
DDX39A-209	ENST00000589318	LINC00518	Q8N0U6	118 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR5L2	Q8NGL0	311 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	RNF138	Q8WVD3	245 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	HGD	Q93099	445 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	SAMD8	Q96LT4	415 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	TBL1XR1	Q9BZK7	514 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR52D1	Q9H346	318 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	MED9	Q9NWA0	146 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	DNAJC27	Q9NZQ0	273 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	MYOT	Q9UBF9	498 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	IL20RA	Q9UHF4	553 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	KIF25	Q9UIL4	384 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	ADAM30	Q9UKF2	790 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	ICAM5	Q9UMF0	924 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	ZNF175	Q9Y473	711 aa		14	□□□□□ -0.17
DDX39A-209	ENST00000589318	GNB5	O14775	395 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	ADRA2A	P08913	450 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	NAT2	P11245	290 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	ZNF250	P15622	560 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	CCR4	P51679	360 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	SPHAR	Q15513	63 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR13C2	Q8NGS9	318 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	UFD1	Q92890	307 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	RBPMS	Q93062	196 aa	Known RBP	13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	KCNJ15	Q99712	375 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	PADI1	Q9ULC6	663 aa		13.99	□□□□□ -0.17
DDX39A-209	ENST00000589318	CPAMD8	Q8IZJ3	1885 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	CCDC187	A0A096LP49	1063 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	SOCS6	O14544	535 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	HCRTR2	O43614	444 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	TLX2	O43763	284 aa	Predicted RBP	13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	EIF4E2	O60573	245 aa	Known RBP	13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	TSC22D2	O75157	780 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	PTP4A3	O75365	173 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	DKK1	O94907	266 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	CELA2A	P08217	269 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	INPP1	P49441	399 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	CRYZ	Q08257	329 aa	Known RBP	13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	TRIP6	Q15654	476 aa	Known RBP	13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	PGGHG	Q32M88	737 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	SYT14P1	Q58G82	188 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	HES3	Q5TGS1	186 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	THSD4	Q6ZMP0	1018 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318		Q8N402	240 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	PROKR2	Q8NFJ6	384 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR11G2	Q8NGC1	345 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	TRMT61A	Q96FX7	289 aa	Known RBP	13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	CCNL2	Q96S94	520 aa	Predicted RBP	13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	TMEM43	Q9BTV4	400 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	ADAM19	Q9H013	955 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	MED28	Q9H204	178 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	UBQLN3	Q9H347	655 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	FOXJ2	Q9P0K8	574 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	NCDN	Q9UBB6	729 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	PCSK5	Q92824	1860 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318		A0A1B0GVI7	797 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	BHLHE40	O14503	412 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	SURF4	O15260	269 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	CDRT1	O95170	752 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	DHFR	P00374	187 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	FOLR3	P41439	243 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC6A8	P48029	635 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	TOMM34	Q15785	309 aa	Predicted RBP	13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	SNAPC1	Q16533	368 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	KLHL22	Q53GT1	634 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	CLVS2	Q5SYC1	327 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	CDK20	Q8IZL9	346 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR5M3	Q8NGP4	307 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	TMEM163	Q8TC26	289 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	FANK1	Q8TC84	345 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	CT55	Q8WUE5	264 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	PPP1R3E	Q9H7J1	279 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	MGAT4A	Q9UM21	535 aa		13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	DIMT1	Q9UNQ2	313 aa	Known RBP	13.98	□□□□□ -0.17
DDX39A-209	ENST00000589318	TRAV27	A0A087WT01	109 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	KRBOX1	C9JBD0	128 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	FABP7	O15540	132 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR2J2	O76002	312 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	WISP1	O95388	367 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	CH25H	O95992	272 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	GAA	P10253	952 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	SAG	P10523	405 aa	Predicted RBP	13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	ANXA3	P12429	323 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC1A3	P43003	542 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	GAS1	P54826	345 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	RPS18	P62269	152 aa	Known RBP	13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	EIF3I	Q13347	325 aa	Known RBP	13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	OR2T33	Q8NG76	320 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms