RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 TMEM151BQ8IW70 566 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 GPR135Q8IZ08 494 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 EID2Q8N6I1 236 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 DNAJC5GQ8N7S2 189 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 YIPF7Q8N8F6 280 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 OR51L1Q8NGJ5 315 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 DAZLQ92904 295 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 RCC1LQ96I51 464 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 LCORQ96JN0 433 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ALG12Q9BV10 488 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 MED28Q9H204 178 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 PPIL3Q9H2H8 161 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 TMEM165Q9HC07 324 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 PNO1Q9NRX1 252 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF275Q9NSD4 429 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 DTX4Q9Y2E6 619 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 MRPS17Q9Y2R5 130 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 MRPS7Q9Y2R9 242 aaKnown RBP6.75□□□□□ -1.33
ZNF540-206ENST00000589117 ADAM18Q9Y3Q7 739 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 NUBP2Q9Y5Y2 271 aa6.75□□□□□ -1.33
ZNF540-206ENST00000589117 FRG2CA6NGY1 282 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 PHYHO14832 338 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 CTDSPLO15194 276 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 SLC25A12O75746 678 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 OR2B3O76000 313 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 ECDO95905 644 aaPredicted RBP6.74□□□□□ -1.33
ZNF540-206ENST00000589117 CXCR1P25024 350 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 STOMP27105 288 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 FNTBP49356 437 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 CENPAP49450 140 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 CTXN1P60606 82 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 SNTB2Q13425 540 aaKnown RBP6.74□□□□□ -1.33
ZNF540-206ENST00000589117 DYRK1AQ13627 763 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 EFR3AQ14156 821 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF74Q16587 644 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 ANKRD39Q53RE8 183 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 UBE2NLQ5JXB2 153 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 RNFT1Q5M7Z0 435 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 UNQ9370/PRO34162Q6UXP9 181 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 NANOGNBQ7Z5D8 188 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 LUZP2Q86TE4 346 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 ATG4DQ86TL0 474 aaPredicted RBP6.74□□□□□ -1.33
ZNF540-206ENST00000589117 NR2C2APQ86WQ0 139 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 PLXDC1Q8IUK5 500 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 SLC7A5P1Q8MH63 180 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 FRMD1Q8N878 549 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 FAM71CQ8NEG0 241 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 CADM4Q8NFZ8 388 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 UPRTQ96BW1 309 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 CLIP3Q96DZ5 547 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 S100A16Q96FQ6 103 aaKnown RBP6.74□□□□□ -1.33
ZNF540-206ENST00000589117 HYLS1Q96M11 299 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 ADAD1Q96M93 576 aaKnown RBP6.74□□□□□ -1.33
ZNF540-206ENST00000589117 ZFP3Q96NJ6 502 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 FYTTD1Q96QD9 318 aaKnown RBP6.74□□□□□ -1.33
ZNF540-206ENST00000589117 GFM1Q96RP9 751 aaKnown RBP6.74□□□□□ -1.33
ZNF540-206ENST00000589117 GTPBP2Q9BX10 602 aaKnown RBP6.74□□□□□ -1.33
ZNF540-206ENST00000589117 NMNAT2Q9BZQ4 307 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 TCF7L1Q9HCS4 588 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 EMC7Q9NPA0 242 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 COPS7AQ9UBW8 275 aa6.74□□□□□ -1.33
ZNF540-206ENST00000589117 MYO9BQ13459 2157 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 OR6C68A6NDL8 312 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 HSPB2A8KAH6 182 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 LMO7DNF2Z398 122 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 XKRYO14609 159 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 SULT1B1O43704 296 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 GFRA3O60609 400 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 SERPINI2O75830 405 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 UTS2O95399 124 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 PAHP00439 452 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 TFP02787 698 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 RAB40ALP0C0E4 278 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 PF4V1P10720 104 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 SRFP11831 508 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 TCEA1P23193 301 aaKnown RBP6.73□□□□□ -1.33
ZNF540-206ENST00000589117 BLVRAP53004 296 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 HCCSP53701 268 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 SLC37A1P57057 533 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 HSD11B2P80365 405 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 MRPS10P82664 201 aaKnown RBP6.73□□□□□ -1.33
ZNF540-206ENST00000589117 ELAVL1Q15717 326 aaKnown RBP6.73□□□□□ -1.33
ZNF540-206ENST00000589117 HSPB2Q16082 182 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 LRRN1Q6UXK5 716 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 IL20RBQ6UXL0 311 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 SSX6Q7RTT6 188 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 ZFAND1Q8TCF1 268 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 RAB40AQ8WXH6 277 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 ABHD1Q96SE0 405 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 OR8D2Q9GZM6 311 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 LAT2Q9GZY6 243 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 COMMD4Q9H0A8 199 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 MS4A5Q9H3V2 200 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 RANBP3Q9H6Z4 567 aaPredicted RBP6.73□□□□□ -1.33
ZNF540-206ENST00000589117 FKRPQ9H9S5 495 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 MMP25Q9NPA2 562 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 CUTCQ9NTM9 273 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 MCUBQ9NWR8 336 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 PTTG3PQ9NZH4 202 aa6.73□□□□□ -1.33
ZNF540-206ENST00000589117 LAMP5Q9UJQ1 280 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms