RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 RUNX1T1Q06455 604 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 RGNQ15493 299 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 TRIP10Q15642 601 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 GSG1Q2KHT4 349 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 TRMT5Q32P41 509 aaKnown RBP12.05□□□□□ -0.48
VMP1-209ENST00000588915 RPS26P11Q5JNZ5 115 aaPredicted RBP12.05□□□□□ -0.48
VMP1-209ENST00000588915 KRT80Q6KB66 452 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 CROCCP2Q86T23 111 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 UEVLDQ8IX04 471 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 C20orf196Q8IYI0 205 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 SCAIQ8N9R8 606 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 ZNF417Q8TAU3 575 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 RDH5Q92781 318 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 SLC41A3Q96GZ6 507 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 MAELQ96JY0 434 aaKnown RBP12.05□□□□□ -0.48
VMP1-209ENST00000588915 ZNF75AQ96N20 296 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 ZNF587Q96SQ5 575 aaPredicted RBP12.05□□□□□ -0.48
VMP1-209ENST00000588915 RACGAP1Q9H0H5 632 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 KCNK9Q9NPC2 374 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 A4GALTQ9NPC4 353 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 SDR39U1Q9NRG7 319 aaPredicted RBP12.05□□□□□ -0.48
VMP1-209ENST00000588915 SEC14L4Q9UDX3 406 aa12.05□□□□□ -0.48
VMP1-209ENST00000588915 MS4A18H0YCH9 400 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 SNNO75324 88 aaPredicted RBP12.04□□□□□ -0.48
VMP1-209ENST00000588915 ZNF14P17017 642 aaPredicted RBP12.04□□□□□ -0.48
VMP1-209ENST00000588915 GPR6P46095 362 aaPredicted RBP12.04□□□□□ -0.48
VMP1-209ENST00000588915 IL1RL1Q01638 556 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 MS4A18Q3C1V0 323 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 ELFN2Q5R3F8 820 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 ULK3Q6PHR2 472 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 TMEM186Q96B77 213 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 SLC47A1Q96FL8 570 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 EPYCQ99645 322 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 MRPL37Q9BZE1 423 aaKnown RBP12.04□□□□□ -0.48
VMP1-209ENST00000588915 OCEL1Q9H607 264 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 ZNF385DQ9H6B1 395 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 POFUT2Q9Y2G5 429 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 GRIP1Q9Y3R0 1128 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 NOX1Q9Y5S8 564 aa12.04□□□□□ -0.48
VMP1-209ENST00000588915 IGKV1D-42A0A075B6H8 117 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 A0A087WUJ7 227 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 A0A1B0GWA3 101 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 ZNF726A6NNF4 738 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 C5orf58C9J3I9 102 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 LYNX1G3V0Z9 82 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 M0R3G1 203 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 CLIC1O00299 241 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 ENTPD5O75356 428 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 LYNX1P0DP58 116 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 CFPP27918 469 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 COMPP49747 757 aaPredicted RBP12.03□□□□□ -0.48
VMP1-209ENST00000588915 POLR2JP52435 117 aaKnown RBP12.03□□□□□ -0.48
VMP1-209ENST00000588915 HOXC5Q00444 222 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 CCNIQ14094 377 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 MMEL1Q495T6 779 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 GTDC1Q4AE62 458 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 ALG10BQ5I7T1 473 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 C6orf10Q5SRN2 563 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 HHATQ5VTY9 493 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 NXNQ6DKJ4 435 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 DHRS4L2Q6PKH6 230 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 NHLRC1Q6VVB1 395 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 ZNF813Q6ZN06 617 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 RINLQ6ZS11 566 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 USP43Q70EL4 1123 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.03□□□□□ -0.48
VMP1-209ENST00000588915 GTF2H4Q92759 462 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 VPS33AQ96AX1 596 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 TRIM44Q96DX7 344 aaPredicted RBP12.03□□□□□ -0.48
VMP1-209ENST00000588915 SPATA5L1Q9BVQ7 753 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 TPK1Q9H3S4 243 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 EVA1AQ9H8M9 152 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 HIF1ANQ9NWT6 349 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 MRPL39Q9NYK5 338 aaKnown RBP12.03□□□□□ -0.48
VMP1-209ENST00000588915 SELENONQ9NZV5 590 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 KLHL14Q9P2G3 628 aa12.03□□□□□ -0.48
VMP1-209ENST00000588915 ZNF346Q9UL40 294 aaKnown RBP12.03□□□□□ -0.48
VMP1-209ENST00000588915 UBDO15205 165 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 UBL3O95164 117 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 VENTXO95231 258 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 RAB36O95755 333 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 HLA-HP01893 362 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 MSMBP08118 114 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 CD79AP11912 226 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 ANPEPP15144 967 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 NQO1P15559 274 aaKnown RBP12.02□□□□□ -0.49
VMP1-209ENST00000588915 COL8A2P25067 703 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 LSP1P33241 339 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 RAB1AP62820 205 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 GALK2Q01415 458 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 FXNQ16595 210 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 MSMPQ1L6U9 139 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 PHYHD1Q5SRE7 291 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 PIWIL3Q7Z3Z3 882 aaKnown RBP12.02□□□□□ -0.49
VMP1-209ENST00000588915 PXKQ7Z7A4 578 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 KRT73Q86Y46 540 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 BHLHE22Q8NFJ8 381 aaPredicted RBP12.02□□□□□ -0.49
VMP1-209ENST00000588915 SEMA6DQ8NFY4 1073 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 CLDND2Q8NHS1 167 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 MGARPQ8TDB4 240 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms