RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 MED29Q9NX70 200 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 MCTS1Q9ULC4 181 aaKnown RBP12.95□□□□□ -0.34
NPC1-207ENST00000588867 SVILO95425 2214 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 IMPA2O14732 288 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 VAMP5O95183 116 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 APEHP13798 732 aaKnown RBP12.95□□□□□ -0.34
NPC1-207ENST00000588867 ZNF3P17036 446 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 GABRB1P18505 474 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 SNRPGP62308 76 aaKnown RBP12.95□□□□□ -0.34
NPC1-207ENST00000588867 EFNB1P98172 346 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 SMN1Q16637 294 aaKnown RBP12.95□□□□□ -0.34
NPC1-207ENST00000588867 KRTCAP3Q53RY4 240 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 ZNF362Q5T0B9 420 aaPredicted RBP12.95□□□□□ -0.34
NPC1-207ENST00000588867 GPR139Q6DWJ6 353 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 FCRLAQ7L513 359 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 CPOQ8IVL8 374 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 APH1BQ8WW43 257 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 SNRNP40Q96DI7 357 aaKnown RBP12.95□□□□□ -0.34
NPC1-207ENST00000588867 LRR1Q96L50 414 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 NMNAT3Q96T66 252 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 TUBA1CQ9BQE3 449 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 FANCFQ9NPI8 374 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 CLN6Q9NWW5 311 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 DNAJC27Q9NZQ0 273 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 KLHL21Q9UJP4 597 aa12.95□□□□□ -0.34
NPC1-207ENST00000588867 ERVH48-1M5A8F1 160 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 XKRYO14609 159 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 WBP4O75554 376 aaKnown RBP12.94□□□□□ -0.34
NPC1-207ENST00000588867 ACVR2AP27037 513 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 ITGADQ13349 1161 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 KRR1Q13601 381 aaKnown RBP12.94□□□□□ -0.34
NPC1-207ENST00000588867 CRMP1Q14194 572 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 ST3GAL2Q16842 350 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 EMC4Q5J8M3 183 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 C6orf141Q5SZD1 244 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 EEF1A1P5Q5VTE0 462 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 PLBD1Q6P4A8 553 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 LEG1Q6P5S2 330 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 UGT2A3Q6UWM9 527 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 FAM26EQ8N5C1 309 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 ARIH2OSQ8N7S6 290 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 SLC37A3Q8NCC5 494 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 BPIFB6Q8NFQ5 453 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 FNDC9Q8TBE3 224 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 ZNF775Q96BV0 537 aaPredicted RBP12.94□□□□□ -0.34
NPC1-207ENST00000588867 EMC6Q9BV81 110 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 PRDM14Q9GZV8 571 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 MED20Q9H944 212 aa12.94□□□□□ -0.34
NPC1-207ENST00000588867 H2AFY2Q9P0M6 372 aaPredicted RBP12.94□□□□□ -0.34
NPC1-207ENST00000588867 MAP1BP46821 2468 aaKnown RBP12.94□□□□□ -0.34
NPC1-207ENST00000588867 PRRC2CQ9Y520 2896 aaKnown RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 ALPK2Q86TB3 2170 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 LOC102725191A0A1B0GVB3 256 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 TTLL8A6PVC2 850 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 PRR23D1E9PI22 279 aaPredicted RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 H7C1C5 153 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 ENTPD6O75354 484 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 TXNDC12O95881 172 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 PRR23D2P0DMB1 279 aaPredicted RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 CDKN2AP42771 156 aaKnown RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 DAP3P51398 398 aaKnown RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 BIDP55957 195 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 LCN6P62502 163 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 RASGEF1BQ0VAM2 473 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 DBPQ10586 325 aaPredicted RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 SLC17A1Q14916 467 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 PRR30Q53SZ7 412 aaPredicted RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 MESTQ5EB52 335 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 ZNF324BQ6AW86 544 aaPredicted RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 LAIR2Q6ISS4 152 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 CXXC5Q7LFL8 322 aaKnown RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 OR9K2Q8NGE7 335 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 FBLIM1Q8WUP2 373 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 Q96MT0 163 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 AMBNQ9NP70 447 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 HINT3Q9NQE9 182 aaKnown RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 ASF1BQ9NVP2 202 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 OR14I1A6ND48 311 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 CLCA1A8K7I4 914 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 IGHMP01871 453 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 PAICSP22234 425 aaKnown RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 PTGS2P35354 604 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 CHN2P52757 468 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 NUDT6P53370 316 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 CLDN17P56750 224 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 ARMC4Q5T2S8 1044 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 CREB3L2Q70SY1 520 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 ABHD3Q8WU67 409 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 ASB10Q8WXI3 467 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 NR1H4Q96RI1 486 aaPredicted RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 SF3B5Q9BWJ5 86 aaKnown RBP12.93□□□□□ -0.34
NPC1-207ENST00000588867 FN3KQ9H479 309 aa12.93□□□□□ -0.34
NPC1-207ENST00000588867 SLC35F4A4IF30 521 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 OR6C68A6NDL8 312 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 ZNF726A6NNF4 738 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 TRAF3IP2O43734 574 aaPredicted RBP12.92□□□□□ -0.34
NPC1-207ENST00000588867 XPNPEP2O43895 674 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 CYTIPO60759 359 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms