RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 OTX2P32243 289 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 EMP2P54851 167 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 OR10A3P58181 314 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 ID2Q02363 134 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 BTBD16Q32M84 506 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 FAM27D1Q5T7N8 215 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 DMKNQ6E0U4 476 aaPredicted RBP13.3□□□□□ -0.28
CCDC43-203ENST00000588210 LSRQ86X29 649 aaPredicted RBP13.3□□□□□ -0.28
CCDC43-203ENST00000588210 TRMT10AQ8TBZ6 339 aaKnown RBP13.3□□□□□ -0.28
CCDC43-203ENST00000588210 ADAMTS18Q8TE60 1221 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 C4orf36Q96KX1 117 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 OR51V1Q9H2C8 321 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 MEPEQ9NQ76 525 aaPredicted RBP13.3□□□□□ -0.28
CCDC43-203ENST00000588210 MAT2BQ9NZL9 334 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 CACNG2Q9Y698 323 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 SPACA6W5XKT8 324 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 A0A0B4J2E0 115 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 A0A1B0GX12 115 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 CHP2O43745 196 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 FGF17O60258 216 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 NT5EP21589 574 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 EVI2BP34910 448 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 BTCP35070 178 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 NRG3P56975 720 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 RAB38P57729 211 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 SLC3A1Q07837 685 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 POU4F2Q12837 409 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 MRPL28Q13084 256 aaKnown RBP13.3□□□□□ -0.28
CCDC43-203ENST00000588210 CRMP1Q14194 572 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 PRICKLE4Q2TBC4 344 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 TMEM151BQ8IW70 566 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 SHISA5Q8N114 240 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 C17orf47Q8NEP4 570 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 SMPDL3BQ92485 455 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 ABCG5Q9H222 651 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 TMEM27Q9HBJ8 222 aa13.3□□□□□ -0.28
CCDC43-203ENST00000588210 PKD1L2Q7Z442 2459 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 TRAV27A0A087WT01 109 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 C7orf66A4D0T2 115 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 ERVH48-1M5A8F1 160 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 SOX30O94993 753 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 PPP1R3DO95685 299 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 GPR75O95800 540 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 DRD5P21918 477 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 SLC16A1P53985 500 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 POU6F2P78424 691 aaPredicted RBP13.29□□□□□ -0.28
CCDC43-203ENST00000588210 MGAT2Q10469 447 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 DEFB109BQ30KR1 87 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 LAMTOR1Q6IAA8 161 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 ARHGAP11AQ6P4F7 1023 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 FIGNL1Q6PIW4 674 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 CREB3L2Q70SY1 520 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 PPP1R32Q7Z5V6 425 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 MS4A15Q8N5U1 240 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 DEDD2Q8WXF8 326 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 HOXB13Q92826 284 aaPredicted RBP13.29□□□□□ -0.28
CCDC43-203ENST00000588210 ZNF426Q9BUY5 554 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 VN1R1Q9GZP7 353 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 LANCL2Q9NS86 450 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 ST6GALNAC2Q9UJ37 374 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 NPFFR2Q9Y5X5 522 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 HS3ST3B1Q9Y662 390 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 EPG5Q9HCE0 2579 aa13.29□□□□□ -0.28
CCDC43-203ENST00000588210 J3QLW9 94 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 EEF1E1O43324 174 aaKnown RBP13.28□□□□□ -0.28
CCDC43-203ENST00000588210 LDB3O75112 727 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 ALOX12BO75342 701 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 ZNF19P17023 458 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 SLC6A6P31641 620 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 RBM34P42696 430 aaKnown RBP13.28□□□□□ -0.28
CCDC43-203ENST00000588210 OR12D2P58182 307 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 FCRLBQ6BAA4 426 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 ASB18Q6ZVZ8 466 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 ZNF767PQ75MW2 155 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 GHDCQ8N2G8 530 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 TMEM52Q8NDY8 209 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 PLPP5Q8NEB5 264 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 DOK4Q8TEW6 326 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 METTL21AQ8WXB1 218 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 HYLS1Q96M11 299 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 RBCK1Q9BYM8 510 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 MRPS33Q9Y291 106 aaKnown RBP13.28□□□□□ -0.28
CCDC43-203ENST00000588210 A0A0A6YYJ9 748 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 TRAV1-2A0A0B4J238 106 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 GXYLT2A0PJZ3 443 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 CYR61O00622 381 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 FZD7O75084 574 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 CDC123O75794 336 aaPredicted RBP13.28□□□□□ -0.28
CCDC43-203ENST00000588210 NKX2-2O95096 273 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 IFNGP01579 166 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 CLUP10909 449 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 PEPDP12955 493 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 RAB3BP20337 219 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 HTR2BP41595 481 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 EXOSC7Q15024 291 aaKnown RBP13.28□□□□□ -0.28
CCDC43-203ENST00000588210 NTRK2Q16620 822 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 TBR1Q16650 682 aa13.28□□□□□ -0.28
CCDC43-203ENST00000588210 SLC25A35Q3KQZ1 300 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms