RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	EIF3M	Q7L2H7	374 aa	Known RBP	4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	MOB1B	Q7L9L4	216 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	SCD5	Q86SK9	330 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	SLC26A11	Q86WA9	606 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	MARCH9	Q86YJ5	346 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	MFSD6L	Q8IWD5	586 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	BPIFC	Q8NFQ6	507 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	RHOXF1	Q8NHV9	184 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	SPATA3	Q8NHX4	192 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	MS4A4E	Q96PG1	132 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	SELENOI	Q9C0D9	397 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	ACTR6	Q9GZN1	396 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	ZNF702P	Q9H963	129 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009		V9GY05	133 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	MED14	O60244	1454 aa		4.09	□□□□□ -1.75
TUBD1-208	ENST00000588009	BIVM-ERCC5	R4GMW8	1640 aa		4.09	□□□□□ -1.76
TUBD1-208	ENST00000588009	NSG1	A0A0A6YYJ2	146 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	OR2J3	O76001	311 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	INSR	P06213	1382 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	TOP2A	P11388	1531 aa	Known RBP	4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	GATA1	P15976	413 aa	Predicted RBP	4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	ABCC1	P33527	1531 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	MEOX2	P50222	304 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	KRTAP10-7	P60409	375 aa	Predicted RBP	4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	DIP2A	Q14689	1571 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	C15orf32	Q32M92	178 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	ERICH3	Q5RHP9	1530 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	DHX57	Q6P158	1386 aa	Known RBP	4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	OTUD6A	Q7L8S5	288 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	PLA2G4D	Q86XP0	818 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	ZNF677	Q86XU0	584 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	RDH10	Q8IZV5	341 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	COMMD1	Q8N668	190 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	CCDC71L	Q8N9Z2	235 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	FNDC5	Q8NAU1	212 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	KIFAP3	Q92845	792 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	HIST1H4G	Q99525	98 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	P2RY13	Q9BPV8	354 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	LY9	Q9HBG7	655 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	GIN1	Q9NXP7	522 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	TREM2	Q9NZC2	230 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	B4GALT7	Q9UBV7	327 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	CSAG2	Q9Y5P2	127 aa		4.08	□□□□□ -1.76
TUBD1-208	ENST00000588009	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	CCDC88B	A6NC98	1476 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	A2M	P01023	1474 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	USP47	Q96K76	1375 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	CDHR2	Q9BYE9	1310 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009		A6NIZ1	184 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	SERF1A	O75920	110 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	ERLIN2	O94905	339 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	IGHV3-23	P01764	117 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	THY1	P04216	161 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	FGF1	P05230	155 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	TBP	P20226	339 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	GATA2	P23769	480 aa	Predicted RBP	4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	CXCR2	P25025	360 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	PRKAR2B	P31323	418 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	BTD	P43251	543 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	KIR2DS4	P43632	304 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	TNNT2	P45379	298 aa	Predicted RBP	4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	RAB9A	P51151	201 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	FBXW4	P57775	412 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	RAP1B	P61224	184 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	MRPS22	P82650	360 aa	Known RBP	4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	EGFEM1P	Q0D2K5	195 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	PRR30	Q53SZ7	412 aa	Predicted RBP	4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	TIGD3	Q6B0B8	471 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	TMEM53	Q6P2H8	277 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	ASCL5	Q7RTU5	278 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	GTSCR1	Q86UQ5	136 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	PIANP	Q8IYJ0	282 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	KATNAL2	Q8IYT4	538 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	C6orf223	Q8N319	242 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	FAM184A	Q8NB25	1140 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	OR52I1	Q8NGK6	324 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	OR9A1P	Q8NGU1	263 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	TYMSOS	Q8TAI1	123 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	NEIL2	Q969S2	332 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	FAM122A	Q96E09	287 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	OR8B4	Q96RC9	309 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	TMEM59	Q9BXS4	323 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	UBXN6	Q9BZV1	441 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	IQCG	Q9H095	443 aa	Known RBP	4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	RACGAP1	Q9H0H5	632 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	RNF167	Q9H6Y7	350 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009		Q9UF83	564 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	KIF25	Q9UIL4	384 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	TRAF3IP3	Q9Y228	551 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	UGT2A1	Q9Y4X1	527 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	PHF3	Q92576	2039 aa	Known RBP	4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	SPHKAP	Q2M3C7	1700 aa		4.07	□□□□□ -1.76
TUBD1-208	ENST00000588009	AGL	P35573	1532 aa		4.06	□□□□□ -1.76
TUBD1-208	ENST00000588009	MAP3K1	Q13233	1512 aa		4.06	□□□□□ -1.76
TUBD1-208	ENST00000588009	CAMSAP2	Q08AD1	1489 aa		4.06	□□□□□ -1.76
TUBD1-208	ENST00000588009	MSH6	P52701	1360 aa		4.06	□□□□□ -1.76
TUBD1-208	ENST00000588009	BAHCC1	Q9P281	2608 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms