RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 LCN6P62502 163 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 RAET1LQ5VY80 246 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 IGF2-ASQ6U949 168 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 KDM8Q8N371 416 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 SPRYD4Q8WW59 207 aaPredicted RBP17.86■□□□□ 0.45
TRIM47-204ENST00000587339 C5orf34Q96MH7 638 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 CHST11Q9NPF2 352 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 MOKQ9UQ07 419 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 B3GALT5Q9Y2C3 310 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 PCDHGB7Q9Y5F8 929 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 MS4A18H0YCH9 400 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 AKAP8O43823 692 aaKnown RBP17.85■□□□□ 0.45
TRIM47-204ENST00000587339 SFTPDP35247 375 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 ACVR1BP36896 505 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 TGFBR1P36897 503 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 C19orf57Q0VDD7 668 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 ZP4Q12836 540 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 MS4A18Q3C1V0 323 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 OR2T4Q8NH00 348 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 SMAP2Q8WU79 429 aaPredicted RBP17.85■□□□□ 0.45
TRIM47-204ENST00000587339 CENPOQ9BU64 300 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 ALG12Q9BV10 488 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 SYT4Q9H2B2 425 aa17.85■□□□□ 0.45
TRIM47-204ENST00000587339 SRA1Q9HD15 236 aaKnown RBP17.85■□□□□ 0.45
TRIM47-204ENST00000587339 A0A0G2JMM0 328 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 PNMA8CA0A1B0GUJ8 204 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 A0A1W2PPB8 328 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 A0A1W2PQL4 384 aaPredicted RBP17.84■□□□□ 0.45
TRIM47-204ENST00000587339 A0A1W2PRS3 328 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 KIR3DP1A8MWS1 328 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 ZIC3O60481 467 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 AKR7A3O95154 331 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 IGHMP01871 453 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 CD96P40200 585 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 NAA10P41227 235 aaPredicted RBP17.84■□□□□ 0.45
TRIM47-204ENST00000587339 TPBGQ13641 420 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 TOMM20Q15388 145 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 TMEM176BQ3YBM2 270 aaPredicted RBP17.84■□□□□ 0.45
TRIM47-204ENST00000587339 SOWAHCQ53LP3 525 aaPredicted RBP17.84■□□□□ 0.45
TRIM47-204ENST00000587339 LINC01590Q5TEZ4 76 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 SPINK14Q6IE38 97 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 EXD3Q8N9H8 876 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 ZNF519Q8TB69 540 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 UFD1Q92890 307 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 ISG20L2Q9H9L3 353 aaKnown RBP17.84■□□□□ 0.45
TRIM47-204ENST00000587339 TIMMDC1Q9NPL8 285 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 HDGFL3Q9Y3E1 203 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 A0A1W2PNR3 127 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 FAM171A2A8MVW0 826 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 LALBAP00709 142 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 TFP02787 698 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 OR2T7P0C7T2 308 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 HLA-DOBP13765 273 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 PYCR1P32322 319 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 GPR85P60893 370 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 ACSM1Q08AH1 577 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 OR6V1Q8N148 313 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 OR2T27Q8NH04 317 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 UTP23Q9BRU9 249 aaKnown RBP17.84■□□□□ 0.45
TRIM47-204ENST00000587339 DCSTAMPQ9H295 470 aa17.84■□□□□ 0.45
TRIM47-204ENST00000587339 PRSS37A4D1T9 235 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 DCTN6O00399 190 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 SHC1P29353 583 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 ZNF85Q03923 595 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 ATP1A1-AS1Q5TC04 95 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 USP43Q70EL4 1123 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 KLBQ86Z14 1044 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 PM20D2Q8IYS1 436 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 TIMP4Q99727 224 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 EXOSC4Q9NPD3 245 aaKnown RBP17.83■□□□□ 0.44
TRIM47-204ENST00000587339 STUB1Q9UNE7 303 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 NOX1Q9Y5S8 564 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 DOCK10Q96BY6 2186 aa17.83■□□□□ 0.44
TRIM47-204ENST00000587339 CNOT1A5YKK6 2376 aaKnown RBP17.82■□□□□ 0.44
TRIM47-204ENST00000587339 OR2M5A3KFT3 312 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 SELENOFO60613 162 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 FZD7O75084 574 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 GPX5O75715 221 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 ZNF17P17021 662 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 OR2B6P58173 313 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 TUBA1BP68363 451 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 POU3F1Q03052 451 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-204ENST00000587339 MELKQ14680 651 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 TUBA3EQ6PEY2 450 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 LYPD4Q6UWN0 246 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 GDPGP1Q6ZNW5 385 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 TUBA1AQ71U36 451 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 PXKQ7Z7A4 578 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 VASH2Q86V25 355 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 SLC35F2Q8IXU6 374 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 DYNC2LI1Q8TCX1 351 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 SNX18Q96RF0 628 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 PIGQQ9BRB3 760 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 RERGLQ9H628 205 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 RNF167Q9H6Y7 350 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 FANCFQ9NPI8 374 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 DEPPQ9NTK1 212 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 BABAM2Q9NXR7 383 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 DLL3Q9NYJ7 618 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 NPIPA5E9PKD4 350 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms