RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 GLRXP35754 106 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 CAPZA2P47755 286 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 CRISP3P54108 245 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 DSTNP60981 165 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 ACTG1P63261 375 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 PIGFQ07326 219 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 GSG1Q2KHT4 349 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 CARD17Q5XLA6 110 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 PEG10Q86TG7 708 aaKnown RBP10.18□□□□□ -0.78
BRCA1-225ENST00000586385 ZNF584Q8IVC4 421 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 CCDC36Q8IYA8 594 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.18□□□□□ -0.78
BRCA1-225ENST00000586385 RDH5Q92781 318 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 SLC41A3Q96GZ6 507 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 TXNDC15Q96J42 360 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 EMC6Q9BV81 110 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 ROPN1BQ9BZX4 212 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-225ENST00000586385 WDR55Q9H6Y2 383 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-225ENST00000586385 ROPN1Q9HAT0 212 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-225ENST00000586385 TPT1P8Q9HAU6 139 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 ESM1Q9NQ30 184 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 KLHL14Q9P2G3 628 aa10.18□□□□□ -0.78
BRCA1-225ENST00000586385 A0A1B0GWA3 101 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 AIM2O14862 343 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 ZNF500O60304 480 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-225ENST00000586385 DEAF1O75398 565 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-225ENST00000586385 ZCCHC18P0CG32 403 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 NAT2P11245 290 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 CD79AP11912 226 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 B4GALT1P15291 398 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 HOXB9P17482 250 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-225ENST00000586385 EPHA1P21709 976 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 CBLP22681 906 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 CRATP43155 626 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 MAGEB1P43366 347 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 VSNL1P62760 191 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 MRPS11P82912 194 aaKnown RBP10.17□□□□□ -0.78
BRCA1-225ENST00000586385 C1DQ13901 141 aaKnown RBP10.17□□□□□ -0.78
BRCA1-225ENST00000586385 MFSD13AQ14CX5 517 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 LARS2Q15031 903 aaKnown RBP10.17□□□□□ -0.78
BRCA1-225ENST00000586385 FAM69AQ5T7M9 428 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 USP43Q70EL4 1123 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 H1FNTQ75WM6 255 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-225ENST00000586385 C3orf56Q8N813 242 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 ADPRHL1Q8NDY3 354 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 PIK3C3Q8NEB9 887 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 AENQ8WTP8 325 aaKnown RBP10.17□□□□□ -0.78
BRCA1-225ENST00000586385 GCDHQ92947 438 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-225ENST00000586385 MAL2Q969L2 176 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 TSPAN32Q96QS1 320 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 TMEM109Q9BVC6 243 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 TMPRSS13Q9BYE2 586 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 MS4A5Q9H3V2 200 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 MED29Q9NX70 200 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 CALML5Q9NZT1 146 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 PCDHB10Q9UN67 800 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 GRIP1Q9Y3R0 1128 aa10.17□□□□□ -0.78
BRCA1-225ENST00000586385 A0A087WUJ7 227 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 A0A0G2JPF8 293 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 HNRNPCL2B2RXH8 293 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 HNRNPCL3B7ZW38 293 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 HNRNPCL1O60812 293 aaKnown RBP10.16□□□□□ -0.78
BRCA1-225ENST00000586385 BGLAPP02818 100 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 PATE4P0C8F1 98 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 HNRNPCL4P0DMR1 293 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 EPHA3P29320 983 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 GIPRP48546 466 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 PTDSS1P48651 473 aaKnown RBP10.16□□□□□ -0.78
BRCA1-225ENST00000586385 TMEM33P57088 247 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 IFFO1Q0D2I5 559 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 BST1Q10588 318 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 RAB39AQ14964 217 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 ZNF311Q5JNZ3 666 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 FAHD2BQ6P2I3 314 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-225ENST00000586385 ZNF813Q6ZN06 617 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 C10orf111Q8N326 155 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 PAQR4Q8N4S7 273 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-225ENST00000586385 LSMEM1Q8N8F7 131 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 ZDHHC22Q8N966 263 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 OR51F2Q8NH61 342 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 SGMS2Q8NHU3 365 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 ZNF418Q8TF45 676 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-225ENST00000586385 SLC35B4Q969S0 331 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 ZMYND19Q96E35 227 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-225ENST00000586385 FAHD2AQ96GK7 314 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 MOGAT1Q96PD6 335 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 WFDC6Q9BQY6 131 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 C12orf10Q9HB07 376 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 BCL2L10Q9HD36 194 aa10.16□□□□□ -0.78
BRCA1-225ENST00000586385 TRAV36DV7A0A075B6V5 113 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 TRAV20A0A0B4J274 112 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 LRRN3E7EW58 273 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 PPIHO43447 177 aaKnown RBP10.15□□□□□ -0.78
BRCA1-225ENST00000586385 OR2T1O43869 369 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 TPST1O60507 370 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 TPST2O60704 377 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 CLPTM1O96005 669 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 PNPP00491 289 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 BMP2P12643 396 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 GTF2E2P29084 291 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms