RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 LRRN3Q9H3W5 708 aa2.37□□□□□ -2.03
RPRD1A-203ENST00000585879 RMND5AQ9H871 391 aa2.37□□□□□ -2.03
RPRD1A-203ENST00000585879 SIAEQ9HAT2 523 aa2.37□□□□□ -2.03
RPRD1A-203ENST00000585879 C6orf203Q9P0P8 240 aaPredicted RBP2.37□□□□□ -2.03
RPRD1A-203ENST00000585879 SEC14L3Q9UDX4 400 aa2.37□□□□□ -2.03
RPRD1A-203ENST00000585879 NRXN1Q9ULB1 1477 aa2.37□□□□□ -2.03
RPRD1A-203ENST00000585879 POLR3AO14802 1390 aaPredicted RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ANKRD36BQ8N2N9 1353 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 NEURL4Q96JN8 1562 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ZFYVE9O95405 1425 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 THSD7BQ9C0I4 1608 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ANGPT2O15123 496 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 POLR2DO15514 142 aaKnown RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ATP8B1O43520 1251 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 IGHG4P01861 327 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 KLK3P07288 261 aaPredicted RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 CCDC130P13994 396 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 QARSP47897 775 aaKnown RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 GSSP48637 474 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 CASP4P49662 377 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 TPM4P67936 248 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ACVR1Q04771 509 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 EBI3Q14213 229 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 MESDQ14696 234 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 CARD16Q5EG05 197 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 DMRTC1Q5HYR2 192 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 HSDL2Q6YN16 418 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 COX15Q7KZN9 410 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 CCDC50Q8IVM0 306 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 TRMT10AQ8TBZ6 339 aaKnown RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ACER1Q8TDN7 264 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ANKRD7Q92527 254 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 MRPL45Q9BRJ2 306 aaKnown RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 FAM107BQ9H098 131 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 C20orf85Q9H1P6 137 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 MED4Q9NPJ6 270 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 CCL28Q9NRJ3 127 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 QPCTLQ9NXS2 382 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 NUFIP1Q9UHK0 495 aaKnown RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 DDX49Q9Y6V7 483 aaKnown RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 A2ML1A8K2U0 1454 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 MYOM1P52179 1685 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ZC3H13Q5T200 1668 aaKnown RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ARHGEF28Q8N1W1 1705 aaKnown RBP2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ADGRB1O14514 1584 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 A0A1W2PP64 1363 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 ABCC11Q96J66 1382 aa2.36□□□□□ -2.03
RPRD1A-203ENST00000585879 CHD2O14647 1828 aaKnown RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 MAP2P11137 1827 aaKnown RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 MYO3AQ8NEV4 1616 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 PPIP5K1Q6PFW1 1433 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 IQANK1A0A1B0GTG1 560 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 A8MXQ7 604 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 MAGEB4O15481 346 aaPredicted RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 GMFGO60234 142 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 OXSR1O95747 527 aaPredicted RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 PCCAP05165 728 aaPredicted RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 IVLP07476 585 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 TPM1P09493 284 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 CCDC172P0C7W6 258 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 HSMCR30P0CW71 290 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 NEFHP12036 1026 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 FMO3P31513 532 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 RFC4P35249 363 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 RPL13AP40429 203 aaKnown RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 GPM6AP51674 278 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 CCR6P51684 374 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 GTF2A1P52655 376 aaPredicted RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 EFNB2P52799 333 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 DLX1P56177 255 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 ASPHQ12797 758 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 CYTH1Q15438 398 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 ATP6AP1Q15904 470 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 ZNF620Q6ZNG0 422 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 ZNF546Q86UE3 836 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 NDRG1Q92597 394 aaKnown RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 RNF185Q96GF1 192 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 TIMD4Q96H15 378 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 FCRL1Q96LA6 429 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 NRIP2Q9BQI9 281 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 ERP44Q9BS26 406 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 HDHD3Q9BSH5 251 aaPredicted RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 OR11A1Q9GZK7 315 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 SRMSQ9H3Y6 488 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 REEP4Q9H6H4 257 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 EML4Q9HC35 981 aaKnown RBP2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 DEC1Q9P2X7 70 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 TMCO1Q9UM00 188 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 TRAPPC4Q9Y296 219 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 POLDIP2Q9Y2S7 368 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 AGLP35573 1532 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 TULP4Q9NRJ4 1543 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 ELP1O95163 1332 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 TMEM2Q9UHN6 1383 aa2.35□□□□□ -2.03
RPRD1A-203ENST00000585879 ARID1AO14497 2285 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 PTPRMP28827 1452 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 CASZ1Q86V15 1759 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 KIR2DL5BA0A0G2JN68 375 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 KIR2DL5BA0A0G2JPC4 375 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 VGLL3A8MV65 326 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms