RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 CORINQ9Y5Q5 1042 aa16.47■□□□□ 0.23
ATG4D-203ENST00000585752 FLVCR1Q9Y5Y0 555 aa16.47■□□□□ 0.23
ATG4D-203ENST00000585752 ENPP4Q9Y6X5 453 aa16.47■□□□□ 0.23
ATG4D-203ENST00000585752 VPS13CQ709C8 3753 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 FLNAP21333 2647 aaKnown RBP16.46■□□□□ 0.23
ATG4D-203ENST00000585752 AQP7P3A6NL99 342 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 hCG_2039718K7EN88 272 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 OR6A2O95222 327 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 MT-ATP6P00846 226 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 HEXAP06865 529 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 PAX1P15863 534 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 EDNRAP25101 427 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 PTAFRP25105 342 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 GRPRP30550 384 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 CDH11P55287 796 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 H3F3AP84243 136 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 TRAM2Q15035 370 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 SLC22A25Q6T423 547 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 OFCC1Q8IZS5 231 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 TMEM239Q8WW34 195 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 POM121Q96HA1 1249 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 PTDSS2Q9BVG9 487 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 ZNF701Q9NV72 531 aaPredicted RBP16.46■□□□□ 0.23
ATG4D-203ENST00000585752 RHCGQ9UBD6 479 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 MALT1Q9UDY8 824 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 MED31Q9Y3C7 131 aa16.46■□□□□ 0.23
ATG4D-203ENST00000585752 TRIM64A6NGJ6 449 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 TRIM64BA6NI03 449 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 J3KTA2 159 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 M0R082 166 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 M0R1B8 84 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 EBAG9O00559 213 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 RAMP1O60894 148 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 WNT11O96014 354 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 THY1P04216 161 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 FABP3P05413 133 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 RHCEP18577 417 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 ZNF83P51522 516 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 PMS2P3Q13401 168 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 C1DQ13901 141 aaKnown RBP16.45■□□□□ 0.22
ATG4D-203ENST00000585752 SLC17A1Q14916 467 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 ETFDHQ16134 617 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 C9orf135Q5VTT2 229 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 LINC00114Q6XXX2 140 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 H1FNTQ75WM6 255 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-203ENST00000585752 LSRQ86X29 649 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-203ENST00000585752 POMGNT2Q8NAT1 580 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 ZNF417Q8TAU3 575 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 TMEM255BQ8WV15 326 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 SLC7A6OSQ96CW6 309 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-203ENST00000585752 COX4I2Q96KJ9 171 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 ZNF587Q96SQ5 575 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-203ENST00000585752 NANSQ9NR45 359 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 A4GNTQ9UNA3 340 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 B3GALT5Q9Y2C3 310 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 AMDHD2Q9Y303 409 aa16.45■□□□□ 0.22
ATG4D-203ENST00000585752 MAGED1Q9Y5V3 778 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-203ENST00000585752 ZNF469Q96JG9 3925 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-203ENST00000585752 ROS1P08922 2347 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 A0A1W2PR80 420 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 LYPD3O95274 346 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 CH25HO95992 272 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 ZNF43P17038 809 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 CDH2P19022 906 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-203ENST00000585752 ATP6V1B2P21281 511 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 CDKN1AP38936 164 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 SMIM11AP58511 58 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 TRAP1Q12931 704 aaKnown RBP16.44■□□□□ 0.22
ATG4D-203ENST00000585752 FAM98BQ52LJ0 330 aaKnown RBP16.44■□□□□ 0.22
ATG4D-203ENST00000585752 FGD3Q5JSP0 725 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 AGAP6Q5VW22 663 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 LCN8Q6JVE9 175 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 ZNF730Q6ZMV8 503 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 WDR88Q6ZMY6 472 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 TSPYL5Q86VY4 417 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-203ENST00000585752 NKAIN4Q8IVV8 208 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 CDK20Q8IZL9 346 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 FAM86B1Q8N7N1 296 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 SCAIQ8N9R8 606 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 OR9K2Q8NGE7 335 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 LILRB1Q8NHL6 650 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-203ENST00000585752 NEUROG1Q92886 237 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 SEPHS2Q99611 448 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 FKRPQ9H9S5 495 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 KRCC1Q9NPI7 259 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-203ENST00000585752 SETD2Q9BYW2 2564 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-203ENST00000585752 ACANP16112 2415 aa16.44■□□□□ 0.22
ATG4D-203ENST00000585752 FTCDNL1E5RQL4 147 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 AKAP8O43823 692 aaKnown RBP16.43■□□□□ 0.22
ATG4D-203ENST00000585752 LY6G6DO95868 133 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 BGLAPP02818 100 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 MT-ND1P03886 318 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 H1F0P07305 194 aaKnown RBP16.43■□□□□ 0.22
ATG4D-203ENST00000585752 PPP2R2BQ00005 443 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 SPIBQ01892 262 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 CHRNB3Q05901 458 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 FLOT2Q14254 428 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 GABRA6Q16445 453 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 CLEC12BQ2HXU8 276 aa16.43■□□□□ 0.22
ATG4D-203ENST00000585752 KRTAP21-3Q3LHN1 58 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms