RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 NPIPB4C9JG80 1138 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 LRRN3E7EW58 273 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 XKRYO14609 159 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 AKAP8O43823 692 aaKnown RBP9.37□□□□□ -0.91
LIG3-203ENST00000585370 GMFGO60234 142 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 CBR3O75828 277 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 IGHMP01871 453 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 P04436 131 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 SBK2P0C263 348 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 OR2T7P0C7T2 308 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 LIMS3P0CW19 117 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 LIMS4P0CW20 117 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 CPEP16870 476 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 CD53P19397 219 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 GTF2E2P29084 291 aaKnown RBP9.37□□□□□ -0.91
LIG3-203ENST00000585370 DSCR4P56555 118 aaPredicted RBP9.37□□□□□ -0.91
LIG3-203ENST00000585370 RAP1BP61224 184 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 RPS18P62269 152 aaKnown RBP9.37□□□□□ -0.91
LIG3-203ENST00000585370 RAP1AP62834 184 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 ROR2Q01974 943 aaKnown RBP9.37□□□□□ -0.91
LIG3-203ENST00000585370 HSF2Q03933 536 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 SRSF1Q07955 248 aaKnown RBP eCLIP9.37□□□□□ -0.91
LIG3-203ENST00000585370 CDC20Q12834 499 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 GALEQ14376 348 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 IGFBP7Q16270 282 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 TSTQ16762 297 aaKnown RBP9.37□□□□□ -0.91
LIG3-203ENST00000585370 DEFB109BQ30KR1 87 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 ACER2Q5QJU3 275 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 ATP1A1-AS1Q5TC04 95 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 FAM205BPQ63HN1 556 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 OR5M10Q6IEU7 315 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 ARSKQ6UWY0 536 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 H1FNTQ75WM6 255 aaPredicted RBP9.37□□□□□ -0.91
LIG3-203ENST00000585370 FAM122BQ7Z309 247 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 BBS1Q8NFJ9 593 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 OR4F15Q8NGB8 312 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 OR2T4Q8NH00 348 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 OR2T27Q8NH04 317 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 KIAA1143Q96AT1 154 aaPredicted RBP9.37□□□□□ -0.91
LIG3-203ENST00000585370 SLC25A36Q96CQ1 311 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 ZHX1-C8orf76Q96EF9 292 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 ABHD17AQ96GS6 310 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 OPALINQ96PE5 141 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 MNTQ99583 582 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 KLHDC3Q9BQ90 382 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 FANCFQ9NPI8 374 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 TAS2R5Q9NYW4 299 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 ABI3Q9P2A4 366 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 B3GALT5Q9Y2C3 310 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 MRPS18BQ9Y676 258 aaKnown RBP9.37□□□□□ -0.91
LIG3-203ENST00000585370 SPTAN1Q13813 2472 aaKnown RBP9.36□□□□□ -0.91
LIG3-203ENST00000585370 A0A1W2PRG6 482 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 C2orf72A6NCS6 295 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 FTCDNL1E5RQL4 147 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 PLPP3O14495 311 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 SNPHO15079 494 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 SEC14L5O43304 696 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 RNF13O43567 381 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 GLCEO94923 617 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 CELA2AP08217 269 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 ADRA2AP08913 450 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 TFPIP10646 304 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 GALP22466 123 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 GADD45AP24522 165 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 GRPRP30550 384 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 IDUAP35475 653 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 CASRP41180 1078 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 CYB561P49447 251 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 SLC16A1P53985 500 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 TAS2R43P59537 309 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 RPL27P61353 136 aaKnown RBP9.36□□□□□ -0.91
LIG3-203ENST00000585370 FOXF1Q12946 379 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 AIMP2Q13155 320 aaKnown RBP9.36□□□□□ -0.91
LIG3-203ENST00000585370 SELENBP1Q13228 472 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 BICRALQ6AI39 1079 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 TIGD3Q6B0B8 471 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 C3orf33Q6P1S2 294 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 LEG1Q6P5S2 330 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 POMZP3Q6PJE2 187 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 LHFPL3Q86UP9 236 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 PHC2Q8IXK0 858 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 GTPBP8Q8N3Z3 284 aaPredicted RBP9.36□□□□□ -0.91
LIG3-203ENST00000585370 AMER2Q8N7J2 671 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 ARIH2OSQ8N7S6 290 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 WDSUB1Q8N9V3 476 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 ZNF485Q8NCK3 441 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 ADPRHL1Q8NDY3 354 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 SDR9C7Q8NEX9 313 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 OR51G2Q8NGK0 314 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 OR1J4Q8NGS1 313 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 HAVCR2Q8TDQ0 301 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 ADAMTS17Q8TE56 1095 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 SMPDL3BQ92485 455 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 UFD1Q92890 307 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 KISS1RQ969F8 398 aaPredicted RBP9.36□□□□□ -0.91
LIG3-203ENST00000585370 Q96M85 177 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 NMNAT3Q96T66 252 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 CNN2Q99439 309 aaKnown RBP9.36□□□□□ -0.91
LIG3-203ENST00000585370 DCUN1D5Q9BTE7 237 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 TXNIPQ9H3M7 391 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms