RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SLC38A2Q96QD8 506 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 SLC7A7Q9UM01 511 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 ARL2BPQ9Y2Y0 163 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 A0A096LPE4 126 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 ARPC4-TTLL3A0A0A6YYG9 625 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 A0A1W2PPZ6 126 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 PLPP3O14495 311 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 CCDC22O60826 627 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 CD8AP01732 235 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 PTNP21246 168 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 ARF1P84077 181 aaKnown RBP10.82□□□□□ -0.68
SS18-225ENST00000585121 POU3F1Q03052 451 aaPredicted RBP10.82□□□□□ -0.68
SS18-225ENST00000585121 CHRNB3Q05901 458 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 LTBQ06643 244 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 SPOCK1Q08629 439 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 NPTX1Q15818 432 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 ZSCAN26Q16670 478 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 CARD17Q5XLA6 110 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 LINC00114Q6XXX2 140 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 ZNF771Q7L3S4 317 aaPredicted RBP10.82□□□□□ -0.68
SS18-225ENST00000585121 PXKQ7Z7A4 578 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 RBM45Q8IUH3 476 aaKnown RBP10.82□□□□□ -0.68
SS18-225ENST00000585121 CCDC36Q8IYA8 594 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 RP9Q8TA86 221 aaKnown RBP10.82□□□□□ -0.68
SS18-225ENST00000585121 C10orf82Q8WW14 230 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 LRR1Q96L50 414 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 OR2M2Q96R28 347 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 SMR3AQ99954 134 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 SLC19A3Q9BZV2 496 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 POLR2J2Q9GZM3 115 aaKnown RBP10.82□□□□□ -0.68
SS18-225ENST00000585121 POLR2J3Q9H1A7 115 aaKnown RBP10.82□□□□□ -0.68
SS18-225ENST00000585121 CRLF2Q9HC73 371 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 GPR35Q9HC97 309 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 NANSQ9NR45 359 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 SH3GLB1Q9Y371 365 aa10.82□□□□□ -0.68
SS18-225ENST00000585121 M0R3G1 203 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 FXYD1O00168 92 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 TRAF3IP2O43734 574 aaPredicted RBP10.81□□□□□ -0.68
SS18-225ENST00000585121 SERPINI2O75830 405 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 CH25HO95992 272 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 HPRP00739 348 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 CRYAAP02489 173 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 HEXAP06865 529 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 ADORA3P0DMS8 318 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 APOBEC3AP31941 199 aaPredicted RBP10.81□□□□□ -0.68
SS18-225ENST00000585121 IFNA8P32881 189 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 CAPZA2P47755 286 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 TAS2R41P59536 307 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 CEACAM16Q2WEN9 425 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 Q71RC1 249 aaPredicted RBP10.81□□□□□ -0.68
SS18-225ENST00000585121 LINGO2Q7L985 606 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 ARPINQ7Z6K5 226 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 CARM1Q86X55 608 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 CIARTQ8N365 385 aaPredicted RBP10.81□□□□□ -0.68
SS18-225ENST00000585121 OR2T12Q8NG77 320 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 OR4D11Q8NGI4 311 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 OR6N1Q8NGY5 312 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 ZNF583Q96ND8 569 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 MOGAT1Q96PD6 335 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 KATNB1Q9BVA0 655 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 CACNG6Q9BXT2 260 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 PCDHAC1Q9H158 963 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 ARMCX1Q9P291 453 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 MOKQ9UQ07 419 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 POFUT2Q9Y2G5 429 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 PMF1-BGLAPU3KQ54 211 aa10.81□□□□□ -0.68
SS18-225ENST00000585121 IGHV1-18A0A0C4DH31 117 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 ELOVL7A1L3X0 281 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 SLC35F4A4IF30 521 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 VSTM5A8MXK1 200 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 ZNF99A8MXY4 864 aaPredicted RBP10.8□□□□□ -0.68
SS18-225ENST00000585121 FAM220BPB1ANY3 271 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 LRRN3E7EW58 273 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 C11orf98E9PRG8 122 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 KPNA4O00629 521 aaPredicted RBP10.8□□□□□ -0.68
SS18-225ENST00000585121 RNF13O43567 381 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 LY6G6DO95868 133 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 UMPSP11172 480 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 HLA-DOBP13765 273 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 TNK1Q13470 666 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 RAB35Q15286 201 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 ZNF74Q16587 644 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 C3orf36Q3SXR2 165 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 LRRC23Q53EV4 343 aaPredicted RBP10.8□□□□□ -0.68
SS18-225ENST00000585121 DEF8Q6ZN54 512 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 C20orf196Q8IYI0 205 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 TMEM123Q8N131 208 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 FAM169BQ8N8A8 192 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 LZICQ8WZA0 190 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 RCN3Q96D15 328 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 EMC6Q9BV81 110 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 MED29Q9NX70 200 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 PLCE1Q9P212 2302 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 ZNF229Q9UJW7 825 aa10.8□□□□□ -0.68
SS18-225ENST00000585121 ATP6V1G2-DDX39BF2Z307 99 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 ENTPD5O75356 428 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 OR5F1O95221 314 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 IGHV4-39P01824 125 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 COX4I1P13073 169 aa10.79□□□□□ -0.68
SS18-225ENST00000585121 CBR1P16152 277 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms