RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	POLR2J2	Q9GZM3	115 aa	Known RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	FAM107B	Q9H098	131 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	NSRP1	Q9H0G5	558 aa	Known RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	POLR2J3	Q9H1A7	115 aa	Known RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	FKRP	Q9H9S5	495 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	NOX1	Q9Y5S8	564 aa		11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.64	□□□□□ -0.55
SREBF1-223	ENST00000584760	RNF212B	A8MTL3	300 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	RPL36A-HNRNPH2	H7BZ11	118 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760		M0R1B8	84 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	KPNA4	O00629	521 aa	Predicted RBP	11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	PLPP3	O14495	311 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	SHOX2	O60902	331 aa	Predicted RBP	11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	SLC43A1	O75387	559 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	OR5F1	O95221	314 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	OR1E2	P47887	323 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	GYS2	P54840	703 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	CDH11	P55287	796 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	TAS2R41	P59536	307 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	PRPS1	P60891	318 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	IL1RL1	Q01638	556 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	LIPE	Q05469	1076 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	TBRG1	Q3YBR2	411 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	HMBOX1	Q6NT76	420 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	KLHL24	Q6TFL4	600 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	B3GLCT	Q6Y288	498 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	DEF8	Q6ZN54	512 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	PXK	Q7Z7A4	578 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	WDFY1	Q8IWB7	410 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	C10orf53	Q8N6V4	93 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	PIK3C3	Q8NEB9	887 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	ANKK1	Q8NFD2	765 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	OR5J2	Q8NH18	312 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	SMAP2	Q8WU79	429 aa	Predicted RBP	11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	BCL2L2	Q92843	193 aa	Predicted RBP	11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	RADIL	Q96JH8	1075 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	HOPX	Q9BPY8	73 aa	Predicted RBP	11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	ALG2	Q9H553	416 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	CXorf56	Q9H5V9	222 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	EFCAB1	Q9HAE3	211 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	OBP2B	Q9NPH6	170 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	MEPE	Q9NQ76	525 aa	Predicted RBP	11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	MED29	Q9NX70	200 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	ABCD2	Q9UBJ2	740 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	MGAT4B	Q9UQ53	548 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	LAMP3	Q9UQV4	416 aa		11.63	□□□□□ -0.55
SREBF1-223	ENST00000584760	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	GMNC	A6NCL1	334 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	OVOL3	O00110	214 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	CH25H	O95992	272 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	ASAH2B	P0C7U1	165 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	PRDX6	P30041	224 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	GSK3B	P49841	420 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	RPS4X	P62701	263 aa	Known RBP	11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	SELENOW	P63302	87 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	PIN1	Q13526	163 aa	Predicted RBP	11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	PHYHD1	Q5SRE7	291 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	ANKRD16	Q6P6B7	361 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	SLC46A3	Q7Z3Q1	461 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	DTX2	Q86UW9	622 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	NKAIN4	Q8IVV8	208 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	GPR137C	Q8N3F9	429 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	ZNF837	Q96EG3	531 aa	Predicted RBP	11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	TXNDC15	Q96J42	360 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	TPD52L3	Q96J77	140 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	EMC6	Q9BV81	110 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	C1QTNF6	Q9BXI9	259 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	GPR35	Q9HC97	309 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	NANS	Q9NR45	359 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	CISD1	Q9NZ45	108 aa	Known RBP	11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	RIMS3	Q9UJD0	308 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	ZNF229	Q9UJW7	825 aa		11.62	□□□□□ -0.55
SREBF1-223	ENST00000584760	TLN2	Q9Y4G6	2542 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	ATR	Q13535	2644 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	SLC35F4	A4IF30	521 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760		E7EQL1	145 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	CXCR6	O00574	342 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	WNT11	O96014	354 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	IGF2	P01344	180 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	MT-ND1	P03886	318 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	ADORA3	P0DMS8	318 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	THRB	P10828	461 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	AHCY	P23526	432 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	RBM34	P42696	430 aa	Known RBP	11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	UGT2B15	P54855	530 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	GNGT1	P63211	74 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	ZP4	Q12836	540 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	CEACAM16	Q2WEN9	425 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	SLC22A25	Q6T423	547 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	VTCN1	Q7Z7D3	282 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	CPLX4	Q7Z7G2	160 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	C20orf196	Q8IYI0	205 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	LRRC17	Q8N6Y2	441 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	PFN4	Q8NHR9	129 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	TMEM255B	Q8WV15	326 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	CMTM5	Q96DZ9	223 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	PRRC1	Q96M27	445 aa		11.61	□□□□□ -0.55
SREBF1-223	ENST00000584760	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms