RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 CCDC22O60826 627 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 KRT34O76011 436 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 IGKV3-15P01624 115 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 IGLV1-44P01699 117 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 HEXAP06865 529 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 THRBP10828 461 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 CDH2P19022 906 aaPredicted RBP11.48□□□□□ -0.57
ERBB2-220ENST00000584684 RBM34P42696 430 aaKnown RBP11.48□□□□□ -0.57
ERBB2-220ENST00000584684 UBE2NP61088 152 aaKnown RBP11.48□□□□□ -0.57
ERBB2-220ENST00000584684 KRTAP21-3Q3LHN1 58 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 TTC33Q6PID6 262 aaPredicted RBP11.48□□□□□ -0.57
ERBB2-220ENST00000584684 DNM1P46Q6ZS02 220 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 CARM1Q86X55 608 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 CCDC36Q8IYA8 594 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 C20orf196Q8IYI0 205 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 CIARTQ8N365 385 aaPredicted RBP11.48□□□□□ -0.57
ERBB2-220ENST00000584684 OR2T12Q8NG77 320 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 RCN3Q96D15 328 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 SLC38A2Q96QD8 506 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 PRSS27Q9BQR3 290 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 CRLF2Q9HC73 371 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 GPR35Q9HC97 309 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 ZNF229Q9UJW7 825 aa11.48□□□□□ -0.57
ERBB2-220ENST00000584684 IGHV1-18A0A0C4DH31 117 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 ZNF99A8MXY4 864 aaPredicted RBP11.47□□□□□ -0.57
ERBB2-220ENST00000584684 LRRN3E7EW58 273 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 ATP6V1G2-DDX39BF2Z307 99 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 H7C417 338 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 OR5F1O95221 314 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 IGHV4-39P01824 125 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 ASAH2BP0C7U1 165 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 COX4I1P13073 169 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 HLA-DOBP13765 273 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 CBLP22681 906 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 CDKN1AP38936 164 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 ARF1P84077 181 aaKnown RBP11.47□□□□□ -0.57
ERBB2-220ENST00000584684 IL1RL1Q01638 556 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 ZP4Q12836 540 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 SF3A3Q12874 501 aaKnown RBP eCLIP11.47□□□□□ -0.57
ERBB2-220ENST00000584684 CEACAM16Q2WEN9 425 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 C8orf82Q6P1X6 216 aaPredicted RBP11.47□□□□□ -0.57
ERBB2-220ENST00000584684 HACD2Q6Y1H2 254 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 MICU2Q8IYU8 434 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 FBXL14Q8N1E6 418 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 MUC15Q8N387 334 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 C10orf53Q8N6V4 93 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 POM121Q96HA1 1249 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 ADAD1Q96M93 576 aaKnown RBP11.47□□□□□ -0.57
ERBB2-220ENST00000584684 C1QTNF6Q9BXI9 259 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 B3GAT2Q9NPZ5 323 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 USP22Q9UPT9 525 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 SH3GLB1Q9Y371 365 aa11.47□□□□□ -0.57
ERBB2-220ENST00000584684 ELOVL7A1L3X0 281 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 SLC35F4A4IF30 521 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 ADORA3P0DMS8 318 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 PTNP21246 168 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 KDELR2P33947 212 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 CYBRD1Q53TN4 286 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 CLEC9AQ6UXN8 241 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 SLC46A3Q7Z3Q1 461 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 SPATA21Q7Z572 469 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 POU5F2Q8N7G0 328 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 LIPHQ8WWY8 451 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 ZNF837Q96EG3 531 aaPredicted RBP11.46□□□□□ -0.57
ERBB2-220ENST00000584684 SMR3AQ99954 134 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 MEPEQ9NQ76 525 aaPredicted RBP11.46□□□□□ -0.57
ERBB2-220ENST00000584684 NANSQ9NR45 359 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 MED29Q9NX70 200 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 CMTM6Q9NX76 183 aa11.46□□□□□ -0.57
ERBB2-220ENST00000584684 ABCA2Q9BZC7 2435 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 A0A096LPE4 126 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 A0A1W2PPZ6 126 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 HTR3EA5X5Y0 456 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 M0R3G1 203 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 NDUFAB1O14561 156 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 PDE5AO76074 875 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 CH25HO95992 272 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 CRYAAP02489 173 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 MT-ND1P03886 318 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 CECR9P0C854 216 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 CBR1P16152 277 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 HOXB4P17483 251 aaPredicted RBP11.45□□□□□ -0.58
ERBB2-220ENST00000584684 APOBEC3AP31941 199 aaPredicted RBP11.45□□□□□ -0.58
ERBB2-220ENST00000584684 ARR3P36575 388 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 FABP6P51161 128 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 SELENOWP63302 87 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 NAAAQ02083 359 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 CLEC12BQ2HXU8 276 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 LRRC23Q53EV4 343 aaPredicted RBP11.45□□□□□ -0.58
ERBB2-220ENST00000584684 PHYHD1Q5SRE7 291 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 SLC15A3Q8IY34 581 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 OR6X1Q8NH79 312 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 TXNDC15Q96J42 360 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 HS6ST2Q96MM7 605 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 HOPXQ9BPY8 73 aaPredicted RBP11.45□□□□□ -0.58
ERBB2-220ENST00000584684 EMC6Q9BV81 110 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 CACNG6Q9BXT2 260 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 MYLK2Q9H1R3 596 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 TAS2R5Q9NYW4 299 aa11.45□□□□□ -0.58
ERBB2-220ENST00000584684 MOKQ9UQ07 419 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms