RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CTBP2P56545 445 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 CLDN20P56880 219 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 PRKCDQ05655 676 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 GINS1Q14691 196 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 CDSNQ15517 529 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 SGCBQ16585 318 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 OCLNQ16625 522 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 ELOA3BQ3SY89 546 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 TMEM201Q5SNT2 666 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 NSUN5P2Q63ZY6 315 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 HBMQ6B0K9 141 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 C5orf46Q6UWT4 87 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 ATG4DQ86TL0 474 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 ATP6V1C2Q8NEY4 427 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 ELOA3Q8NG57 546 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 OR2T33Q8NG76 320 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 FANK1Q8TC84 345 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 RFKQ969G6 155 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNF524Q96C55 264 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 CCDC120Q96HB5 630 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 FAM46AQ96IP4 442 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 TSC22D3Q99576 134 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 BCL7BQ9BQE9 202 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 WFDC6Q9BQY6 131 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 CALHM2Q9HA72 323 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 MEMO1Q9Y316 297 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 HDGFL3Q9Y3E1 203 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNF175Q9Y473 711 aa12.08□□□□□ -0.48
CSNK1D-220ENST00000581737 EFCAB9A8MZ26 197 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 SYNGR4O95473 234 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 IGF2P01344 180 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 SAGP10523 405 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 IFI30P13284 250 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 IL11P20809 199 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 EIF1AXP47813 144 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 GIPRP48546 466 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 SLC9A3P48764 834 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 CLDN15P56746 228 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 CSNK2A1P68400 391 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 SNAPC1Q16533 368 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 TMEM176BQ3YBM2 270 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 ANKDD1AQ495B1 522 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 SLC25A30Q5SVS4 291 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNF620Q6ZNG0 422 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 TMPRSS11FQ6ZWK6 438 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 AHSA2Q719I0 299 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 MRGPRGQ86SM5 289 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 ADGRG3Q86Y34 549 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 NKAIN4Q8IVV8 208 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 SPARTQ8N0X7 666 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 OR10D3Q8NH80 312 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 TMEM255BQ8WV15 326 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 CPNE4Q96A23 557 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 ZHX1-C8orf76Q96EF9 292 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 OR5B2Q96R09 309 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 UCN2Q96RP3 112 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 TRIB1Q96RU8 372 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 PCNX1Q96RV3 2341 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 PTTG2Q9NZH5 202 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 WARS2Q9UGM6 360 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 PSORS1C1Q9UIG5 152 aa12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 MCTS1Q9ULC4 181 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 KLF2Q9Y5W3 355 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-220ENST00000581737 MTORP42345 2549 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 A0A0J9YW62 118 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 SLC22A20A6NK97 555 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 A8MVM7 634 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNF99A8MXY4 864 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 TNFSF11O14788 317 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 DNPH1O43598 174 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 XPNPEP2O43895 674 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 EFNA2O43921 213 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 WBP4O75554 376 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 CCNA2P20248 432 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 EPHA2P29317 976 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 GRK5P34947 590 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 SUCLG1P53597 346 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 CARD18P57730 90 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 CDK5Q00535 292 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 TBCEQ15813 527 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 KRTAP21-3Q3LHN1 58 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 KLHL22Q53GT1 634 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 RPTNQ6XPR3 784 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 C3P1Q6ZMU1 363 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 P4HA3Q7Z4N8 544 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 ADGRE4PQ86SQ3 457 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 CLVS1Q8IUQ0 354 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 STK35Q8TDR2 534 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 WNT2BQ93097 391 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 BPIFA2Q96DR5 249 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 ADGRG7Q96K78 797 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 ZFP3Q96NJ6 502 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 DMRTA2Q96SC8 542 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 TM9SF2Q99805 663 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 TSSK6Q9BXA6 273 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 POTEKPQ9BYX7 375 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 CHCHD3Q9NX63 227 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNF226Q9NYT6 803 aa12.06□□□□□ -0.48
CSNK1D-220ENST00000581737 IL20Q9NYY1 176 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms