RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 C20orf196Q8IYI0 205 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 C10orf111Q8N326 155 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 C1QTNF6Q9BXI9 259 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 ASPNQ9BXN1 380 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 IKZF5Q9H5V7 419 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 CRLF2Q9HC73 371 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 B3GAT2Q9NPZ5 323 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 SLC13A4Q9UKG4 626 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 USP22Q9UPT9 525 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 NDUFAF1Q9Y375 327 aa12.6□□□□□ -0.39
SMARCE1-216ENST00000580419 CHP2O43745 196 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 TPST2O60704 377 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 BGLAPP02818 100 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 FAM157CP0CG43 387 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 USF1P22415 310 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 GZMKP49863 264 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 PDLIM4P50479 330 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 ARF1P84077 181 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 HOXC5Q00444 222 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 PUDPQ08623 228 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 ZP4Q12836 540 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 ADIPOQQ15848 244 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 CHRFAM7AQ494W8 412 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 NRN1LQ496H8 165 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 TTMPQ5BVD1 217 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 COQ5Q5HYK3 327 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 INTS11Q5TA45 600 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 CXXC5Q7LFL8 322 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 COMTD1Q86VU5 262 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 PTOV1Q86YD1 416 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 UEVLDQ8IX04 471 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 ZNF525Q8N782 197 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 DYDC1Q8WWB3 177 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 MPP4Q96JB8 637 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 CGREF1Q99674 301 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 ARHGDIGQ99819 225 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 ZNF426Q9BUY5 554 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 POLR2J2Q9GZM3 115 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 POLR2J3Q9H1A7 115 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 KAT8Q9H7Z6 458 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 B3GNT2Q9NY97 397 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 FBN3Q75N90 2809 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 SVEP1Q4LDE5 3571 aa12.59□□□□□ -0.39
SMARCE1-216ENST00000580419 CUBNO60494 3623 aa12.58□□□□□ -0.39
SMARCE1-216ENST00000580419 CDH2P19022 906 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 GIFP27352 417 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 IDH3GP51553 393 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 CDH12P55289 794 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 CEACAM16Q2WEN9 425 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 GLIPR1L2Q4G1C9 344 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 CCDC80Q76M96 950 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 HDXQ7Z353 690 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 DPPA2Q7Z7J5 298 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 DHDDSQ86SQ9 333 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 KDM8Q8N371 416 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 MAPK1IP1LQ8NDC0 245 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 NEU4Q8WWR8 484 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 SH3GL1Q99961 368 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 RAB1BQ9H0U4 201 aa12.58□□□□□ -0.4
SMARCE1-216ENST00000580419 HTR3EA5X5Y0 456 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 CENPBD1B2RD01 187 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 PLPP3O14495 311 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 ANGPT2O15123 496 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 ERCC1P07992 297 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 OR4A8P0C604 315 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 NQO1P15559 274 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 NR4A2P43354 598 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 LSM11P83369 360 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 HGFACQ04756 655 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 LGALS3BPQ08380 585 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 DUSP7Q16829 419 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 CYB5R2Q6BCY4 276 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 UGT2A3Q6UWM9 527 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 PIWIL3Q7Z3Z3 882 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 OR5J2Q8NH18 312 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 OR6X1Q8NH79 312 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 NANOS1Q8WY41 292 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 ZBTB9Q96C00 473 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 FBXO17Q96EF6 278 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF75AQ96N20 296 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 DOK1Q99704 481 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 MDFIQ99750 246 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 PIMREGQ9BSJ6 248 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 YAE1D1Q9NRH1 226 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 SEC14L4Q9UDX3 406 aa12.57□□□□□ -0.4
SMARCE1-216ENST00000580419 IGHV2OR16-5A0A0B4J2B6 119 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 M0QX08 132 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 EDF1O60869 148 aaKnown RBP12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 HPRP00739 348 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 NPR2P20594 1047 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 PTNP21246 168 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 CALCRP30988 508 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 PCGF2P35227 344 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 PMS2P3Q13401 168 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 CYP51A1Q16850 503 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 SORCS2Q96PQ0 1159 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 MCHR1Q99705 422 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF229Q9UJW7 825 aa12.56□□□□□ -0.4
SMARCE1-216ENST00000580419 SPEF1Q9Y4P9 236 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms