RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	GABRA5	P31644	462 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	APOBEC1	P41238	236 aa	Known RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	ASMT	P46597	345 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	IER3	P46695	156 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	CLK1	P49759	484 aa	Known RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	CCNG1	P51959	295 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	KLF3	P57682	345 aa	Predicted RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	SLC35A2	P78381	396 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	SLC35A1	P78382	337 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	GALNT1	Q10472	559 aa	Predicted RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	MERTK	Q12866	999 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	TBX2	Q13207	712 aa	Predicted RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	SLC17A1	Q14916	467 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	SGO1	Q5FBB7	561 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	LRIG3	Q6UXM1	1119 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	ZC3HC1	Q86WB0	502 aa	Known RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	CCDC170	Q8IYT3	715 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	LYG1	Q8N1E2	194 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	ZNF614	Q8N883	585 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	CDRT4	Q8N9R6	151 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	RAB40A	Q8WXH6	277 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	ST8SIA1	Q92185	356 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	ELP4	Q96EB1	424 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	NEURL3	Q96EH8	262 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	DNAJA3	Q96EY1	480 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	THOC1	Q96FV9	657 aa	Known RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	HES6	Q96HZ4	224 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	AMDHD1	Q96NU7	426 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	DCLRE1C	Q96SD1	692 aa	Known RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	TRIM15	Q9C019	465 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	EGLN1	Q9GZT9	426 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	IQCG	Q9H095	443 aa	Known RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	ELOVL6	Q9H5J4	265 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	ALG9	Q9H6U8	611 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	ACOXL	Q9NUZ1	547 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	C14orf119	Q9NWQ9	140 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	PRR13	Q9NZ81	148 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	GRHL1	Q9NZI5	618 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	TMEM181	Q9P2C4	612 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	TRAPPC4	Q9Y296	219 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	LRCH1	Q9Y2L9	728 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	SF3B6	Q9Y3B4	125 aa	Known RBP	4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	CACNG2	Q9Y698	323 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	DNAH9	Q9NYC9	4486 aa		4.99	□□□□□ -1.61
KPNB1-209	ENST00000580158	STAB2	Q8WWQ8	2551 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SYCE1L	A8MT33	242 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	RNASEK-C17orf49	H0YIS7	233 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	UBXN8	O00124	270 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	ANKRD28	O15084	1053 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	RAD51C	O43502	376 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	EIF4E2	O60573	245 aa	Known RBP	4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	BCKDHA	P12694	445 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	ZNF35	P13682	527 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	GFAP	P14136	432 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	TSPAN8	P19075	237 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	DRD4	P21917	467 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	ETV4	P43268	484 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	PRKAG1	P54619	331 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SESN3	P58005	492 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	KRTAP10-11	P60412	298 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SEC61A1	P61619	476 aa	Known RBP	4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	POU6F2	P78424	691 aa	Predicted RBP	4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	H3F3A	P84243	136 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	TMEM155	Q4W5P6	130 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	PRAMEF8	Q5VWM4	474 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	PRAMEF7	Q5VXH5	474 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	CLEC6A	Q6EIG7	209 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SLC35E4	Q6ICL7	350 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	KRTAP5-3	Q6L8H2	238 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	C6orf89	Q6UWU4	347 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	RAPH1	Q70E73	1250 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	GOLGA7	Q7Z5G4	137 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	GPAT4	Q86UL3	456 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	MDP1	Q86V88	176 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	NDUFA11	Q86Y39	141 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	PPIL6	Q8IXY8	311 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	C1orf52	Q8N6N3	182 aa	Known RBP	4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	COX18	Q8N8Q8	333 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	DTX3	Q8N9I9	347 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	CLRN3	Q8NCR9	226 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	WFDC9	Q8NEX5	89 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SYNPR	Q8TBG9	265 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SELENOM	Q8WWX9	145 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	DDB2	Q92466	427 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	CHMP6	Q96FZ7	201 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SPATA25	Q9BR10	227 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	THUMPD3	Q9BV44	507 aa	Known RBP	4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SF3B5	Q9BWJ5	86 aa	Known RBP	4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	RHOJ	Q9H4E5	214 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	BRF2	Q9HAW0	419 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	NMRAL1	Q9HBL8	299 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	NSMCE4A	Q9NXX6	385 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	CHRNA9	Q9UGM1	479 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	SLC7A8	Q9UHI5	535 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	FOXJ3	Q9UPW0	622 aa		4.98	□□□□□ -1.61
KPNB1-209	ENST00000580158	HYDIN	Q4G0P3	5121 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms