RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 LOXP28300 417 aaPredicted RBP14.36□□□□□ -0.11
RARA-209ENST00000579727 BIDP55957 195 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 RPL18Q07020 188 aaKnown RBP14.36□□□□□ -0.11
RARA-209ENST00000579727 CAMK2DQ13557 499 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 PPA1Q15181 289 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 GABRA6Q16445 453 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 FGD3Q5JSP0 725 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 PHYHD1Q5SRE7 291 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 ZNF730Q6ZMV8 503 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 CDH24Q86UP0 819 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 OR52J3Q8NH60 311 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 MOSPD2Q8NHP6 518 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 BPIFA2Q96DR5 249 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 PLPPR2Q96GM1 343 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 SEPHS2Q99611 448 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 THTPAQ9BU02 230 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 NMNAT1Q9HAN9 279 aaPredicted RBP14.36□□□□□ -0.11
RARA-209ENST00000579727 PRPF19Q9UMS4 504 aaKnown RBP14.36□□□□□ -0.11
RARA-209ENST00000579727 FAM32AQ9Y421 112 aaKnown RBP14.36□□□□□ -0.11
RARA-209ENST00000579727 NOX1Q9Y5S8 564 aa14.36□□□□□ -0.11
RARA-209ENST00000579727 SPG11Q96JI7 2443 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 LOC102725191A0A1B0GVB3 256 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 OR5H1A6NKK0 313 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 M0R3G1 203 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 AKAP8O43823 692 aaKnown RBP14.35□□□□□ -0.11
RARA-209ENST00000579727 SEC14L2O76054 403 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 MPGP29372 298 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 AQP2P41181 271 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 GPR4P46093 362 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 MS4A2Q01362 244 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 ROR2Q01974 943 aaKnown RBP14.35□□□□□ -0.11
RARA-209ENST00000579727 SPATS1Q496A3 300 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 HIKESHIQ53FT3 197 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 BEX5Q5H9J7 111 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 SEZ6L2Q6UXD5 910 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 NHLRC1Q6VVB1 395 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 SLC35D2Q76EJ3 337 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 PXKQ7Z7A4 578 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 TMEM123Q8N131 208 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 PIK3C3Q8NEB9 887 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 ACOT11Q8WXI4 607 aaPredicted RBP14.35□□□□□ -0.11
RARA-209ENST00000579727 HSD17B8Q92506 261 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 C1QTNF6Q9BXI9 259 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 C1orf21Q9H246 121 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 NPAP1Q9NZP6 1156 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 ACTR3BQ9P1U1 418 aa14.35□□□□□ -0.11
RARA-209ENST00000579727 NIPBLQ6KC79 2804 aaeCLIP14.35□□□□□ -0.11
RARA-209ENST00000579727 TRBV4-1A0A0J9YWV2 114 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 TCRBV5S2A0A599 114 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 GYG2O15488 501 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 PLAUP00749 431 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 FABP3P05413 133 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 H1F0P07305 194 aaKnown RBP14.34□□□□□ -0.11
RARA-209ENST00000579727 SAGP10523 405 aaPredicted RBP14.34□□□□□ -0.11
RARA-209ENST00000579727 RHCEP18577 417 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 SPIBQ01892 262 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 ZP4Q12836 540 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 TESK1Q15569 626 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 IQCCQ4KMZ1 466 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 TIMM23BQ5SRD1 257 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 HMBOX1Q6NT76 420 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 PODNL1Q6PEZ8 512 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 ABHD12BQ7Z5M8 362 aaPredicted RBP14.34□□□□□ -0.11
RARA-209ENST00000579727 IGFN1Q86VF2 1251 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 DHFR2Q86XF0 187 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 ARHGAP24Q8N264 748 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 GPR137CQ8N3F9 429 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 ANKK1Q8NFD2 765 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 SLC7A13Q8TCU3 470 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 MCUR1Q96AQ8 359 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 SLC7A6OSQ96CW6 309 aaPredicted RBP14.34□□□□□ -0.11
RARA-209ENST00000579727 MUCL1Q96DR8 90 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 ZNF837Q96EG3 531 aaPredicted RBP14.34□□□□□ -0.11
RARA-209ENST00000579727 PIP5K1AQ99755 562 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 LINC00470Q9BZP3 86 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 PLEKHF2Q9H8W4 249 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 UBTD1Q9HAC8 227 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 GPR35Q9HC97 309 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 PLEKHA6Q9Y2H5 1048 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 FBN3Q75N90 2809 aa14.34□□□□□ -0.11
RARA-209ENST00000579727 TRAV27A0A087WT01 109 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 A0A096LPE4 126 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 A0A1W2PPZ6 126 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 OR6C65A6NJZ3 312 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 ZNF726A6NNF4 738 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 GOSR1O95249 250 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 ZNF83P51522 516 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 TUBA1BP68363 451 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 TUBA4AP68366 448 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 PRKCDQ05655 676 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 TRIM25Q14258 630 aaKnown RBP14.33□□□□□ -0.12
RARA-209ENST00000579727 LAPTM4AQ15012 233 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 CEACAM16Q2WEN9 425 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 LCN8Q6JVE9 175 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 MBOAT2Q6ZWT7 520 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 TUBA1AQ71U36 451 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 ZDHHC21Q8IVQ6 265 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 WDR31Q8NA23 367 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 OR1K1Q8NGR3 316 aa14.33□□□□□ -0.12
RARA-209ENST00000579727 OR13C2Q8NGS9 318 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms