RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 GGHQ92820 318 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 NINJ1Q92982 152 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 MUL1Q969V5 352 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 OTULINQ96BN8 352 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 DTNBP1Q96EV8 351 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 TMEM80Q96HE8 168 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 ADAM19Q9H013 955 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 CXXC4Q9H2H0 198 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 FN3KQ9H479 309 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 SLC24A3Q9HC58 644 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 MEPEQ9NQ76 525 aaPredicted RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 NANSQ9NR45 359 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 SERINC1Q9NRX5 453 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 DNAJC27Q9NZQ0 273 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 ERGIC3Q9Y282 383 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 SIGLEC7Q9Y286 467 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 SLC6A5Q9Y345 797 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 SPIN1Q9Y657 262 aaPredicted RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 TRAV36DV7A0A075B6V5 113 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 TRAV27A0A087WT01 109 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 TMED7-TICAM2A0A0A6YYA0 188 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 A8MVM7 634 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 PRR23D1E9PI22 279 aaPredicted RBP9.13□□□□□ -0.95
SS18-210ENST00000578700 H3BSA7 217 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 IDH3BO43837 385 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 OR2T1O43869 369 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 PTP4A3O75365 173 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 CTAG2O75638 210 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 AHSA1O95433 338 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 MT-ATP6P00846 226 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 PRR23D2P0DMB1 279 aaPredicted RBP9.13□□□□□ -0.95
SS18-210ENST00000578700 PEPDP12955 493 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 CCNA2P20248 432 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 PSMB9P28065 219 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 GTF2E2P29084 291 aaKnown RBP9.13□□□□□ -0.95
SS18-210ENST00000578700 SOX3P41225 446 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 APOBEC1P41238 236 aaKnown RBP9.13□□□□□ -0.95
SS18-210ENST00000578700 CDH11P55287 796 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 DLX5P56178 289 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 LTBQ06643 244 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 RAB40BQ12829 278 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 TBCEQ15813 527 aaPredicted RBP9.13□□□□□ -0.95
SS18-210ENST00000578700 SYT14P1Q58G82 188 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 EMC4Q5J8M3 183 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 ARMC4Q5T2S8 1044 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 DESI1Q6ICB0 168 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 POMZP3Q6PJE2 187 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 ARSKQ6UWY0 536 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 B3GNT6Q6ZMB0 384 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 DPY19L2P2Q6ZN68 376 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 CXXC5Q7LFL8 322 aaKnown RBP9.13□□□□□ -0.95
SS18-210ENST00000578700 GPALPP1Q8IXQ4 340 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 LNX2Q8N448 690 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 ANKK1Q8NFD2 765 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 OR4K17Q8NGC6 315 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 OR13F1Q8NGS4 319 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 OR4Q3Q8NH05 313 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 GPR119Q8TDV5 335 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 ZNF582Q96NG8 517 aaPredicted RBP9.13□□□□□ -0.95
SS18-210ENST00000578700 TNFRSF13CQ96RJ3 184 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 SMR3AQ99954 134 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 CDCA4Q9BXL8 241 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 CLEC4MQ9H2X3 399 aaPredicted RBP9.13□□□□□ -0.95
SS18-210ENST00000578700 FKBP14Q9NWM8 211 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 PAK1IP1Q9NWT1 392 aaPredicted RBP9.13□□□□□ -0.95
SS18-210ENST00000578700 HPF1Q9NWY4 346 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 IL20RAQ9UHF4 553 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 KLHL21Q9UJP4 597 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 ZNF229Q9UJW7 825 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 OSGIN1Q9UJX0 560 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 TMED7Q9Y3B3 224 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 WIF1Q9Y5W5 379 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 JMJD1CQ15652 2540 aa9.13□□□□□ -0.95
SS18-210ENST00000578700 PINLYPA6NC86 204 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 KDM4EB2RXH2 506 aaPredicted RBP9.12□□□□□ -0.95
SS18-210ENST00000578700 G3V3Y1 287 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 BHLHE40O14503 412 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 MYL12BO14950 172 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 SUSD5O60279 629 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 SEC14L2O76054 403 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 OR6A2O95222 327 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 RAB36O95755 333 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 HTR1AP08908 422 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 DBTP11182 482 aaKnown RBP9.12□□□□□ -0.95
SS18-210ENST00000578700 FKBP2P26885 142 aaKnown RBP9.12□□□□□ -0.95
SS18-210ENST00000578700 ACVR2AP27037 513 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 CASP3P42574 277 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 KIR2DL3P43628 341 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 MTNR1AP48039 350 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 MASP1P48740 699 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 TMBIM6P55061 237 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 ADAM8P78325 824 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 ZNF91Q05481 1191 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 LGALS3BPQ08380 585 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 TMED1Q13445 227 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 MFSD13AQ14CX5 517 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 ZNF74Q16587 644 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 CNPY1Q3B7I2 92 aa9.12□□□□□ -0.95
SS18-210ENST00000578700 ZNF791Q3KP31 576 aaPredicted RBP9.12□□□□□ -0.95
SS18-210ENST00000578700 GPR107Q5VW38 600 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms