RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 C4orf17Q53FE4 359 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 TMEM201Q5SNT2 666 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 CARD17Q5XLA6 110 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 TMEM211Q6ICI0 200 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 RPL13AP3Q6NVV1 102 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 CASP12Q6UXS9 341 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 CD300LDQ6UXZ3 194 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 CREB3L2Q70SY1 520 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 SLC35D2Q76EJ3 337 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.79□□□□□ -0.68
IFT20-207ENST00000578547 IQCF1Q8N6M8 205 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 NAXEQ8NCW5 288 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 ZNF385AQ96PM9 386 aaKnown RBP10.79□□□□□ -0.68
IFT20-207ENST00000578547 DMRTA2Q96SC8 542 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 EMC6Q9BV81 110 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 TSSK6Q9BXA6 273 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 C12orf49Q9H741 205 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 GLRX2Q9NS18 164 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 MED29Q9NX70 200 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 USE1Q9NZ43 259 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 NOSIPQ9Y314 301 aaKnown RBP10.79□□□□□ -0.68
IFT20-207ENST00000578547 EMC9Q9Y3B6 208 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 ADAM18Q9Y3Q7 739 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 FLVCR1Q9Y5Y0 555 aa10.79□□□□□ -0.68
IFT20-207ENST00000578547 IGKV3D-15A0A087WSY6 115 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 A0A0G2JNJ9 132 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 TEX13CA0A0J9YWL9 993 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 A0A1B0GUH1 482 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 GPR171O14626 319 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 CD14P08571 375 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 TSPAN19P0C672 248 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 CDH2P19022 906 aaPredicted RBP10.78□□□□□ -0.68
IFT20-207ENST00000578547 DAP3P51398 398 aaKnown RBP10.78□□□□□ -0.68
IFT20-207ENST00000578547 RAD23AP54725 363 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 BIDP55957 195 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 PDK3Q15120 406 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 RIPPLY2Q5TAB7 128 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 NIPAL3Q6P499 406 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 DPY19L2P2Q6ZN68 376 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 FAM214BQ7L5A3 538 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 AAED1Q7RTV5 226 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 NUFIP2Q7Z417 695 aaKnown RBP10.78□□□□□ -0.68
IFT20-207ENST00000578547 CCDC71Q8IV32 467 aaPredicted RBP10.78□□□□□ -0.68
IFT20-207ENST00000578547 PARP8Q8N3A8 854 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 CLDN22Q8N7P3 220 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 ZIC4Q8N9L1 334 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 LRRC75AQ8NAA5 344 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 NRG4Q8WWG1 115 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 RND1Q92730 232 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 TXNDC15Q96J42 360 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 ZNF570Q96NI8 536 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 ZFP3Q96NJ6 502 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 ERMAPQ96PL5 475 aaPredicted RBP10.78□□□□□ -0.68
IFT20-207ENST00000578547 TSPAN32Q96QS1 320 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 TACO1Q9BSH4 297 aaKnown RBP10.78□□□□□ -0.68
IFT20-207ENST00000578547 VCXQ9H320 206 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 BCO1Q9HAY6 547 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 IL20Q9NYY1 176 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 Q9UFV3 132 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 IER3IP1Q9Y5U9 82 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 HIVEP3Q5T1R4 2406 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 MYO7BQ6PIF6 2116 aa10.78□□□□□ -0.68
IFT20-207ENST00000578547 ARHGAP21Q5T5U3 1957 aa10.77□□□□□ -0.68
IFT20-207ENST00000578547 FLNCQ14315 2725 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 LOC102725191A0A1B0GVB3 256 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 HSPB2A8KAH6 182 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 ZNF724A8MTY0 619 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 AKAP8O43823 692 aaKnown RBP10.77□□□□□ -0.69
IFT20-207ENST00000578547 MRPL33O75394 65 aaKnown RBP10.77□□□□□ -0.69
IFT20-207ENST00000578547 SMNDC1O75940 238 aaKnown RBP eCLIP10.77□□□□□ -0.69
IFT20-207ENST00000578547 BCL10O95999 233 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 BMP5P22003 454 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 CTSSP25774 331 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 NOS3P29474 1203 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 CEACAM8P31997 349 aaPredicted RBP10.77□□□□□ -0.69
IFT20-207ENST00000578547 ACVR1BP36896 505 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 RPS6KA3P51812 740 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 CRISP1P54107 249 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 RPL27P61353 136 aaKnown RBP10.77□□□□□ -0.69
IFT20-207ENST00000578547 CAMK2DQ13557 499 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 GINS1Q14691 196 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 HSPB2Q16082 182 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 TMEM236Q5W0B7 351 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 VWA1Q6PCB0 445 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 ZNF100Q8IYN0 542 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 OR2T33Q8NG76 320 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 OR4Q3Q8NH05 313 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 ASB10Q8WXI3 467 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 RASD2Q96D21 266 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 CCDC120Q96HB5 630 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 Q96M85 177 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 GPX7Q96SL4 187 aaPredicted RBP10.77□□□□□ -0.69
IFT20-207ENST00000578547 MBOAT4Q96T53 435 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 TXNIPQ9H3M7 391 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 TOR3AQ9H497 397 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 GP6Q9HCN6 339 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 FANCFQ9NPI8 374 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 NRIP3Q9NQ35 241 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 GRHPRQ9UBQ7 328 aa10.77□□□□□ -0.69
IFT20-207ENST00000578547 ENOPH1Q9UHY7 261 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms