RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MFSD4AQ8N468 514 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 OR2M3Q8NG83 312 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 OR11G2Q8NGC1 345 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 OR10G3Q8NGC4 313 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 TCEAL3Q969E4 200 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 PMEPA1Q969W9 287 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 KCTD12Q96CX2 325 aaKnown RBP10.06□□□□□ -0.8
SKA2-204ENST00000578519 TSPAN32Q96QS1 320 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 INTS14Q96SY0 518 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 KCNS3Q9BQ31 491 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 HDHD5Q9BXW7 423 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 ANGPTL4Q9BY76 406 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 CDCP1Q9H5V8 836 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 WDR76Q9H967 626 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 CHST11Q9NPF2 352 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 TAS2R5Q9NYW4 299 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 NCDNQ9UBB6 729 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 LAMP5Q9UJQ1 280 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 TCFL5Q9UL49 500 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 NPIPA1Q9UND3 350 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 PMF1-BGLAPU3KQ54 211 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 SPTBP11277 2137 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 PI4KAP42356 2102 aa10.06□□□□□ -0.8
SKA2-204ENST00000578519 ARID1BQ8NFD5 2236 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 ZC3H12DA2A288 527 aaKnown RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 PRSS37A4D1T9 235 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 ZNF879B4DU55 563 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 PDCD5O14737 125 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 TLX3O43711 291 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 PFDN1O60925 122 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 DLGAP3O95886 979 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 P04436 131 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 OCM2P0CE71 109 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 OCMP0CE72 109 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 EDNRAP25101 427 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 MAPK3P27361 379 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 TGFBR1P36897 503 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 NAA10P41227 235 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 DSCR4P56555 118 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 OR12D2P58182 307 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 INSM1Q01101 510 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 TLE3Q04726 772 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 CHAF1BQ13112 559 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 HNRNPA0Q13151 305 aaKnown RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 OR7A5Q15622 319 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 ACKR1Q16570 336 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 KCTD18Q6PI47 426 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 B3GLCTQ6Y288 498 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 C16orf47Q6ZP98 133 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 TRILQ7L0X0 811 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 PXKQ7Z7A4 578 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 ZBTB46Q86UZ6 589 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 ARMC10Q8N2F6 343 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 ZNF454Q8N9F8 522 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 OR1J4Q8NGS1 313 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 ZNF417Q8TAU3 575 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 ABHD4Q8TB40 342 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 CHPT1Q8WUD6 406 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 KIAA1143Q96AT1 154 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 RNF31Q96EP0 1072 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 FRMD6Q96NE9 622 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 RBP7Q96R05 134 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 ZNF587Q96SQ5 575 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 PHOX2BQ99453 314 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 TM9SF2Q99805 663 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 PRRX2Q99811 253 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 NAA11Q9BSU3 229 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 PTDSS2Q9BVG9 487 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 SLITRK2Q9H156 845 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 TPK1Q9H3S4 243 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 RERGLQ9H628 205 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 RNF167Q9H6Y7 350 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 ISG20L2Q9H9L3 353 aaKnown RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 ZNF160Q9HCG1 818 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 VSX1Q9NZR4 365 aaPredicted RBP10.05□□□□□ -0.8
SKA2-204ENST00000578519 DAPK2Q9UIK4 370 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 GNG8Q9UK08 70 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 VDAC3Q9Y277 283 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 TRAPPC4Q9Y296 219 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 R4GN57 208 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 RP1P56715 2156 aa10.05□□□□□ -0.8
SKA2-204ENST00000578519 LAMA3Q16787 3333 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 TRAV1-2A0A0B4J238 106 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 TRBV2A0A0J9YWF9 115 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.04□□□□□ -0.8
SKA2-204ENST00000578519 SLC35F4A4IF30 521 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
SKA2-204ENST00000578519 CBR3O75828 277 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 UPK1BO75841 260 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 HLA-DQA2P01906 255 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 SERPINA7P05543 415 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 ZNF823P16415 610 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 OTX2P32243 289 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 CASRP41180 1078 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 SLC35A1P78382 337 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 GLO1Q04760 184 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 MXD1Q05195 221 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 SLC3A1Q07837 685 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 FOXF1Q12946 379 aa10.04□□□□□ -0.8
SKA2-204ENST00000578519 CDK5R1Q15078 307 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms