RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 TMEM123Q8N131 208 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 SLC41A3Q96GZ6 507 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 ITCHQ96J02 903 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 ALKBH3Q96Q83 286 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 SORT1Q99523 831 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 NKIRAS2Q9NYR9 191 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 SLC7A8Q9UHI5 535 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 COL6A5A8TX70 2615 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 TRIM77I1YAP6 450 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 M0R233 179 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 LY6HO94772 140 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 MVDP53602 400 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 CLDN17P56750 224 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 STX3Q13277 289 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 C1DQ13901 141 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 MOGQ16653 247 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 PCGF3Q3KNV8 242 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 DHRS4L2Q6PKH6 230 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 H1FNTQ75WM6 255 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 CADM2Q8N3J6 435 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 FAM216AQ8WUB2 273 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 OR2M2Q96R28 347 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 SPATA5L1Q9BVQ7 753 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 ZMAT3Q9HA38 289 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 TMEM165Q9HC07 324 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 RPS6KB2Q9UBS0 482 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 REV1Q9UBZ9 1251 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 NOX1Q9Y5S8 564 aa9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 V9GYY5 206 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-214ENST00000578112 HEATR1Q9H583 2144 aaKnown RBP9.69□□□□□ -0.86
SMARCE1-214ENST00000578112 KLF11O14901 512 aa9.69□□□□□ -0.86
SMARCE1-214ENST00000578112 SNTB2Q13425 540 aaKnown RBP9.69□□□□□ -0.86
SMARCE1-214ENST00000578112 TRMT5Q32P41 509 aaKnown RBP9.69□□□□□ -0.86
SMARCE1-214ENST00000578112 NRN1LQ496H8 165 aa9.69□□□□□ -0.86
SMARCE1-214ENST00000578112 SVOPLQ8N434 492 aa9.69□□□□□ -0.86
SMARCE1-214ENST00000578112 TMEM186Q96B77 213 aa9.69□□□□□ -0.86
SMARCE1-214ENST00000578112 ADPRHL2Q9NX46 363 aa9.69□□□□□ -0.86
SMARCE1-214ENST00000578112 B3GAT1Q9P2W7 334 aa9.69□□□□□ -0.86
SMARCE1-214ENST00000578112 SDHDO14521 159 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 ZNF35P13682 527 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 PPIBP23284 216 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 GATA3P23771 443 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 GPR6P46095 362 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 UFM1P61960 85 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 RUNX1T1Q06455 604 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 GSG1Q2KHT4 349 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 CEACAM16Q2WEN9 425 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 IL17RELQ6ZVW7 336 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 MDP1Q86V88 176 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 VRK2Q86Y07 508 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 UEVLDQ8IX04 471 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 AENQ8WTP8 325 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 SLC38A5Q8WUX1 472 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 KLHL14Q9P2G3 628 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 TESQ9UGI8 421 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 MAP1AP78559 2803 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 HDAC3O15379 428 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 PTHP01270 115 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 MSMBP08118 114 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 IGFBP1P08833 259 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 ALDOCP09972 364 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 SAGP10523 405 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 ZNF14P17017 642 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 CDH2P19022 906 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 COX20Q5RI15 118 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 WDR93Q6P2C0 686 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 VHLLQ6RSH7 139 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 C1orf174Q8IYL3 243 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 MGARPQ8TDB4 240 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 SLC47A1Q96FL8 570 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 MAELQ96JY0 434 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 ZNF75AQ96N20 296 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 ASPNQ9BXN1 380 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 NUF2Q9BZD4 464 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 MMADHCQ9H3L0 296 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 TPT1P8Q9HAU6 139 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 NOX3Q9HBY0 568 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 MRPL39Q9NYK5 338 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 POFUT2Q9Y2G5 429 aa9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 RRP15Q9Y3B9 282 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 NUP214P35658 2090 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 SONP18583 2426 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-214ENST00000578112 LINC00854A0A1B0GVQ3 168 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 PRORSD1PA6NEY8 169 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 CENPBD1B2RD01 187 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 TRAF3IP2O43734 574 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 SLC22A3O75751 556 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 MT-ATP6P00846 226 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 BCHEP06276 602 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 ADRA2AP08913 450 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 GKN3PP0CG01 181 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 CFPP27918 469 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 IL12AP29459 219 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 CDKN2CP42773 168 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 SLC18A1P54219 525 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 GALK2Q01415 458 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 EGR4Q05215 589 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 TNFAIP8L3Q5GJ75 292 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 ZNF311Q5JNZ3 666 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms