RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 FILIP1LQ4L180 1135 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 BOLA3Q53S33 107 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 PHYHD1Q5SRE7 291 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 BEND3Q5T5X7 828 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 LRRC31Q6UY01 552 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 ZNF620Q6ZNG0 422 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 C12orf56Q8IXR9 622 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 DHRSXQ8N5I4 330 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 DUSP18Q8NEJ0 188 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 OR51S1Q8NGJ8 323 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 BRSK1Q8TDC3 778 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 UFD1Q92890 307 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 EFHD2Q96C19 240 aaPredicted RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 DUS3LQ96G46 650 aaKnown RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 RBM14Q96PK6 669 aaKnown RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 CCT7Q99832 543 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 SPIN2AQ99865 258 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 SPIN2BQ9BPZ2 258 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 NAT9Q9BTE0 207 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 OR11A1Q9GZK7 315 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 PPA2Q9H2U2 334 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 RBKSQ9H477 322 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 ZNF385DQ9H6B1 395 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 REEP4Q9H6H4 257 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 LRRC40Q9H9A6 602 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 UGT1A7Q9HAW7 530 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 UGT1A10Q9HAW8 530 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 UGT1A8Q9HAW9 530 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 FOLH1BQ9HBA9 442 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 SEC14L3Q9UDX4 400 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 PIGLQ9Y2B2 252 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 MRPS7Q9Y2R9 242 aaKnown RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 KCNIP3Q9Y2W7 256 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 F11RQ9Y624 299 aaKnown RBP1.22□□□□□ -2.21
TOP2A-202ENST00000577541 MAD1L1Q9Y6D9 718 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 MYO10Q9HD67 2058 aa1.22□□□□□ -2.21
TOP2A-202ENST00000577541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.21□□□□□ -2.21
TOP2A-202ENST00000577541 ARHGAP21Q5T5U3 1957 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 PHLPP2Q6ZVD8 1323 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 IGHV3OR16-13A0A075B7E8 117 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 XKRY2A2RUG3 117 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF716A6NP11 495 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 E7ESA3 106 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 F5H6K3 240 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 MPHOSPH10O00566 681 aaKnown RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 UGT2B17O75795 530 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF735P0CB33 412 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 KITLGP21583 273 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 CALCRP30988 508 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 RFX3P48380 749 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 CRYBB1P53674 252 aaPredicted RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 ACTR3P61158 418 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 ACVR1Q04771 509 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 KLRC3Q07444 240 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 OR5I1Q13606 314 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 ARFRP1Q13795 201 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 DDX39BQ13838 428 aaKnown RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 FZD2Q14332 565 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 GGTLC2Q14390 218 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 PDK3Q15120 406 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 ZMYND11Q15326 602 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 DPYSL2Q16555 572 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 FAM83EQ2M2I3 478 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 LY6G6FQ5SQ64 297 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 C1orf100Q5SVJ3 147 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 CCDC183Q5T5S1 534 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 PRAMEF20Q5VT98 475 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 KDM7AQ6ZMT4 941 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 Q6ZPB1 254 aaPredicted RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 LINC00173Q6ZV60 143 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 MMAAQ8IVH4 418 aaKnown RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 CDH26Q8IXH8 852 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 NRMQ8IXM6 262 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 CCDC65Q8IXS2 484 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 PNKDQ8N490 385 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 FTMTQ8N4E7 242 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 OR4F6Q8NGB9 312 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 OR13C2Q8NGS9 318 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 OR9G1Q8NH87 305 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 AKR7LQ8NHP1 331 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 TCTEX1D2Q8WW35 142 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 TMEM158Q8WZ71 300 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 N4BP2L2Q92802 583 aaPredicted RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 FGF14Q92915 247 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 TM4SF19Q96DZ7 209 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 ITCHQ96J02 903 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF578Q96N58 590 aaPredicted RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 CNN2Q99439 309 aaKnown RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 COPS8Q99627 209 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 PELOQ9BRX2 385 aaKnown RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 SELENOIQ9C0D9 397 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 POLR2J2Q9GZM3 115 aaKnown RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 POLR2J3Q9H1A7 115 aaKnown RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 CWH43Q9H720 699 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 SMYD3Q9H7B4 428 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 NMRAL1Q9HBL8 299 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 DMAP1Q9NPF5 467 aaPredicted RBP1.21□□□□□ -2.22
TOP2A-202ENST00000577541 CCL28Q9NRJ3 127 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 INPP5EQ9NRR6 644 aa1.21□□□□□ -2.22
TOP2A-202ENST00000577541 TREM2Q9NZC2 230 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms