RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 VSX1Q9NZR4 365 aaPredicted RBP11.16□□□□□ -0.62
TSEN54-204ENST00000577197 DIMT1Q9UNQ2 313 aaKnown RBP11.16□□□□□ -0.62
TSEN54-204ENST00000577197 EXOGQ9Y2C4 368 aaKnown RBP11.16□□□□□ -0.62
TSEN54-204ENST00000577197 PKD1L2Q7Z442 2459 aa11.16□□□□□ -0.62
TSEN54-204ENST00000577197 ZFHX4Q86UP3 3567 aa11.16□□□□□ -0.62
TSEN54-204ENST00000577197 TNRC6AQ8NDV7 1962 aaKnown RBP11.16□□□□□ -0.62
TSEN54-204ENST00000577197 A0A1B0GVC2 190 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 SMIM31A0A1B0GVY4 71 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 XKRYO14609 159 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 AKAP8O43823 692 aaKnown RBP11.15□□□□□ -0.62
TSEN54-204ENST00000577197 TRAPPC6AO75865 159 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 RENP00797 406 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 TFAP2AP05549 437 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 HTR1AP08908 422 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 CPN1P15169 458 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 POU3F2P20265 443 aaPredicted RBP11.15□□□□□ -0.62
TSEN54-204ENST00000577197 ST13P50502 369 aaKnown RBP11.15□□□□□ -0.62
TSEN54-204ENST00000577197 SLC16A1P53985 500 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 ERVK-25P63136 954 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 HSF1Q00613 529 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 KRR1Q13601 381 aaKnown RBP11.15□□□□□ -0.62
TSEN54-204ENST00000577197 IRF3Q14653 427 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 TOMM20Q15388 145 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 ACKR1Q16570 336 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 SMN1Q16637 294 aaKnown RBP11.15□□□□□ -0.62
TSEN54-204ENST00000577197 CPOQ8IVL8 374 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 SPARTQ8N0X7 666 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 MEIOBQ8N635 442 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 LSM14AQ8ND56 463 aaKnown RBP11.15□□□□□ -0.62
TSEN54-204ENST00000577197 NEIL3Q8TAT5 605 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 PTP4A1Q93096 173 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 TMEM80Q96HE8 168 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 TSPAN32Q96QS1 320 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 MNTQ99583 582 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 ALG12Q9BV10 488 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 FAM192AQ9GZU8 254 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 KLHL1Q9NR64 748 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 PAK1IP1Q9NWT1 392 aaPredicted RBP11.15□□□□□ -0.62
TSEN54-204ENST00000577197 DNAJC27Q9NZQ0 273 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 B3GAT1Q9P2W7 334 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 IL20RAQ9UHF4 553 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 ADAM18Q9Y3Q7 739 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 FKBP7Q9Y680 259 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 CELSR3Q9NYQ7 3312 aa11.15□□□□□ -0.62
TSEN54-204ENST00000577197 A0A0J9YW62 118 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 TEX13CA0A0J9YWL9 993 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 PRSS37A4D1T9 235 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 SHISA8B8ZZ34 492 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 PTGES3LE9PB15 166 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 K7EM74 188 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 BCL10O95999 233 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 IGHA1P01876 353 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 ZNF24P17028 368 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 PCMT1P22061 227 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 SFTPDP35247 375 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 MAGEA5P43359 124 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 CD97P48960 835 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 LHX2P50458 406 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 CLDN18P56856 261 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 OR2B6P58173 313 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 RPS3AP61247 264 aaKnown RBP11.14□□□□□ -0.63
TSEN54-204ENST00000577197 ACTC1P68032 377 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 ACTA1P68133 377 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 ST3GAL4Q11206 333 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 CRMP1Q14194 572 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 MESTQ5EB52 335 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 WIPI1Q5MNZ9 446 aaPredicted RBP11.14□□□□□ -0.63
TSEN54-204ENST00000577197 UBE2UQ5VVX9 321 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 VASNQ6EMK4 673 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 ABLIM2Q6H8Q1 611 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 PLBD1Q6P4A8 553 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 DNM1P34Q6PK57 102 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 AHSA2Q719I0 299 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.14□□□□□ -0.63
TSEN54-204ENST00000577197 YRDCQ86U90 279 aaKnown RBP11.14□□□□□ -0.63
TSEN54-204ENST00000577197 ZBTB46Q86UZ6 589 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 UEVLDQ8IX04 471 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 STX19Q8N4C7 294 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 RBMXL3Q8N7X1 1067 aaKnown RBP11.14□□□□□ -0.63
TSEN54-204ENST00000577197 EXD3Q8N9H8 876 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 OR52E2Q8NGJ4 325 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 OR2T4Q8NH00 348 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 OR6X1Q8NH79 312 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 Q96M85 177 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 TEAD3Q99594 435 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 HES7Q9BYE0 225 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 SLC25A18Q9H1K4 315 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 TSPAN10Q9H1Z9 355 aaPredicted RBP11.14□□□□□ -0.63
TSEN54-204ENST00000577197 RNF122Q9H9V4 155 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 ZNF71Q9NQZ8 489 aaPredicted RBP11.14□□□□□ -0.63
TSEN54-204ENST00000577197 KLHL13Q9P2N7 655 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 ZNF346Q9UL40 294 aaKnown RBP11.14□□□□□ -0.63
TSEN54-204ENST00000577197 RCE1Q9Y256 329 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 B3GNT3Q9Y2A9 372 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 GPR52Q9Y2T5 361 aa11.14□□□□□ -0.63
TSEN54-204ENST00000577197 EXOSC1Q9Y3B2 195 aaKnown RBP11.14□□□□□ -0.63
TSEN54-204ENST00000577197 KIAA1549Q9HCM3 1950 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms