RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 C1DQ13901 141 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 GNA13Q14344 377 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 FXNQ16595 210 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 COX20Q5RI15 118 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 BEND6Q5SZJ8 279 aaPredicted RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 ANXA8L1Q5VT79 327 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 REP15Q6BDI9 236 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF836Q6ZNA1 936 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF771Q7L3S4 317 aaPredicted RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 HOMEZQ8IX15 550 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 IFT20Q8IY31 132 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 CCDC36Q8IYA8 594 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 GSPT2Q8IYD1 628 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 CNPY4Q8N129 248 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 BCL6BQ8N143 479 aaPredicted RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 LRRC17Q8N6Y2 441 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 VPS37AQ8NEZ2 397 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 OR52P1PQ8NH57 321 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 MFSD8Q8NHS3 518 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 PNPT1Q8TCS8 783 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 EPS8L3Q8TE67 593 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 AENQ8WTP8 325 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 KTI12Q96EK9 354 aaPredicted RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 OR2M2Q96R28 347 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 EMC6Q9BV81 110 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 AKTIPQ9H8T0 292 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF224Q9NZL3 707 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 NOP53Q9NZM5 478 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 TAAR3PQ9P1P4 343 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 SLC17A7Q9P2U7 560 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 RCE1Q9Y256 329 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 CHST2Q9Y4C5 530 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 CACNG2Q9Y698 323 aa8.63□□□□□ -1.03
NPLOC4-220ENST00000576940 C17orf100A8MU93 164 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 J3QLI3 93 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 AHSA1O95433 338 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 FSHBP01225 129 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 NUDT17P0C025 328 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 HLA-DOBP13765 273 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 NCF2P19878 526 aaPredicted RBP8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 PRTN3P24158 256 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 CDKN2CP42773 168 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 CRYBB2P43320 205 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 RAD52P43351 418 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 VSNL1P62760 191 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 HOXC5Q00444 222 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 MAD2L1Q13257 205 aaPredicted RBP8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 RAB39AQ14964 217 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 NKPD1Q17RQ9 610 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 SPANXN4Q5MJ08 99 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 RBMS3Q6XE24 437 aaKnown RBP8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF813Q6ZN06 617 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF621Q6ZSS3 439 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 WDFY1Q8IWB7 410 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 PEX5LQ8IYB4 626 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF440Q8IYI8 595 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 TMEM123Q8N131 208 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 PIK3C3Q8NEB9 887 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 FGFBP3Q8TAT2 258 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 STK35Q8TDR2 534 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 TAAR8Q969N4 342 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 TXNDC15Q96J42 360 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 C1orf147Q96MC9 270 aaPredicted RBP8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF385DQ9H6B1 395 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 ASIC5Q9NY37 505 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 WIPI2Q9Y4P8 454 aa8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 V9GYY5 206 aaPredicted RBP8.62□□□□□ -1.03
NPLOC4-220ENST00000576940 CCDC154A6NI56 674 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 MS4A18H0YCH9 400 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 M0R082 166 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 SPAG7O75391 227 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 HPRP00739 348 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 IGHV2-5P01817 119 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 FAM157BP0CG42 384 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 CCL2P13500 99 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 B4GALT1P15291 398 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 GTF2E2P29084 291 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 GRPRP30550 384 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 NME5P56597 212 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 LCN2P80188 198 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 SRSF4Q08170 494 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 MFSD13AQ14CX5 517 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 MS4A18Q3C1V0 323 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 SERPINA11Q86U17 422 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF584Q8IVC4 421 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 C20orf196Q8IYI0 205 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF417Q8TAU3 575 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 MGARPQ8TDB4 240 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 GTF3AQ92664 365 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 RAB39BQ96DA2 213 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 TEX37Q96LM6 180 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF48Q96MX3 618 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF587Q96SQ5 575 aaPredicted RBP8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 OR51B6Q9H340 312 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 HINT3Q9NQE9 182 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF446Q9NWS9 450 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF69Q9UC07 566 aa8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 ZNF346Q9UL40 294 aaKnown RBP8.61□□□□□ -1.03
NPLOC4-220ENST00000576940 POFUT2Q9Y2G5 429 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms