RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 EGLN2Q96KS0 407 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 TMEM237Q96Q45 408 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 KCNA7Q96RP8 456 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 CCT7Q99832 543 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 CENPHQ9H3R5 247 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 HINT3Q9NQE9 182 aaKnown RBP5.01□□□□□ -1.61
SMG6-219ENST00000575663 EXOSC3Q9NQT5 275 aaKnown RBP5.01□□□□□ -1.61
SMG6-219ENST00000575663 SIRT3Q9NTG7 399 aaPredicted RBP5.01□□□□□ -1.61
SMG6-219ENST00000575663 NKIRAS2Q9NYR9 191 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 NKIRAS1Q9NYS0 192 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 TAAR3PQ9P1P4 343 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 MYEF2Q9P2K5 600 aaKnown RBP5.01□□□□□ -1.61
SMG6-219ENST00000575663 ASH2LQ9UBL3 628 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 OR5V1Q9UGF6 321 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 DCDC2Q9UHG0 476 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 LEF1Q9UJU2 399 aaPredicted RBP5.01□□□□□ -1.61
SMG6-219ENST00000575663 FBXL3Q9UKT7 428 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 FZR1Q9UM11 496 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 TMED7Q9Y3B3 224 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 RNF114Q9Y508 228 aa5.01□□□□□ -1.61
SMG6-219ENST00000575663 TRAV40A0A0B4J280 105 aa5□□□□□ -1.61
SMG6-219ENST00000575663 TMEM72A0PK05 275 aa5□□□□□ -1.61
SMG6-219ENST00000575663 HMX2A2RU54 273 aa5□□□□□ -1.61
SMG6-219ENST00000575663 DUXAA6NLW8 204 aa5□□□□□ -1.61
SMG6-219ENST00000575663 ZNF99A8MXY4 864 aaPredicted RBP5□□□□□ -1.61
SMG6-219ENST00000575663 SRRM5B3KS81 715 aa5□□□□□ -1.61
SMG6-219ENST00000575663 POC1B-GALNT4F8VUJ3 575 aa5□□□□□ -1.61
SMG6-219ENST00000575663 RPL36A-HNRNPH2H7BZ11 118 aa5□□□□□ -1.61
SMG6-219ENST00000575663 BIRC5O15392 142 aa5□□□□□ -1.61
SMG6-219ENST00000575663 AKAP10O43572 662 aa5□□□□□ -1.61
SMG6-219ENST00000575663 TRAF3IP2O43734 574 aaPredicted RBP5□□□□□ -1.61
SMG6-219ENST00000575663 AKAP8O43823 692 aaKnown RBP5□□□□□ -1.61
SMG6-219ENST00000575663 PIP5K1CO60331 668 aa5□□□□□ -1.61
SMG6-219ENST00000575663 SEC22BO75396 215 aa5□□□□□ -1.61
SMG6-219ENST00000575663 UPK3AO75631 287 aa5□□□□□ -1.61
SMG6-219ENST00000575663 UGT2B17O75795 530 aa5□□□□□ -1.61
SMG6-219ENST00000575663 PRB2P02812 416 aaPredicted RBP5□□□□□ -1.61
SMG6-219ENST00000575663 ZNF12P17014 697 aa5□□□□□ -1.61
SMG6-219ENST00000575663 ATP5F1P24539 256 aaPredicted RBP5□□□□□ -1.61
SMG6-219ENST00000575663 GCAP28676 217 aa5□□□□□ -1.61
SMG6-219ENST00000575663 GTF2E2P29084 291 aaKnown RBP5□□□□□ -1.61
SMG6-219ENST00000575663 CRHR1P34998 444 aa5□□□□□ -1.61
SMG6-219ENST00000575663 SOAT1P35610 550 aa5□□□□□ -1.61
SMG6-219ENST00000575663 PGM1P36871 562 aa5□□□□□ -1.61
SMG6-219ENST00000575663 HPCAL1P37235 193 aa5□□□□□ -1.61
SMG6-219ENST00000575663 RPL3P39023 403 aaKnown RBP5□□□□□ -1.61
SMG6-219ENST00000575663 MAGEA12P43365 314 aa5□□□□□ -1.61
SMG6-219ENST00000575663 IDH2P48735 452 aaKnown RBP5□□□□□ -1.61
SMG6-219ENST00000575663 CCT3P49368 545 aaKnown RBP5□□□□□ -1.61
SMG6-219ENST00000575663 PRKAA2P54646 552 aa5□□□□□ -1.61
SMG6-219ENST00000575663 KLF3P57682 345 aaPredicted RBP5□□□□□ -1.61
SMG6-219ENST00000575663 HPCAP84074 193 aa5□□□□□ -1.61
SMG6-219ENST00000575663 ARF1P84077 181 aaKnown RBP5□□□□□ -1.61
SMG6-219ENST00000575663 CEACAM7Q14002 265 aa5□□□□□ -1.61
SMG6-219ENST00000575663 MOGQ16653 247 aa5□□□□□ -1.61
SMG6-219ENST00000575663 MSMPQ1L6U9 139 aa5□□□□□ -1.61
SMG6-219ENST00000575663 CEACAM16Q2WEN9 425 aa5□□□□□ -1.61
SMG6-219ENST00000575663 UNC50Q53HI1 259 aa5□□□□□ -1.61
SMG6-219ENST00000575663 SAMD5Q5TGI4 173 aa5□□□□□ -1.61
SMG6-219ENST00000575663 PRAMEF8Q5VWM4 474 aa5□□□□□ -1.61
SMG6-219ENST00000575663 PRAMEF7Q5VXH5 474 aa5□□□□□ -1.61
SMG6-219ENST00000575663 RUSC1-AS1Q66K80 236 aa5□□□□□ -1.61
SMG6-219ENST00000575663 CREB3L2Q70SY1 520 aa5□□□□□ -1.61
SMG6-219ENST00000575663 LINGO2Q7L985 606 aa5□□□□□ -1.61
SMG6-219ENST00000575663 C16orf62Q7Z3J2 963 aa5□□□□□ -1.61
SMG6-219ENST00000575663 TRIM46Q7Z4K8 759 aa5□□□□□ -1.61
SMG6-219ENST00000575663 LRP11Q86VZ4 500 aa5□□□□□ -1.61
SMG6-219ENST00000575663 SPICQ8N5J4 248 aa5□□□□□ -1.61
SMG6-219ENST00000575663 TMEM86BQ8N661 226 aa5□□□□□ -1.61
SMG6-219ENST00000575663 NATD1Q8N6N6 113 aa5□□□□□ -1.61
SMG6-219ENST00000575663 TMEM99Q8N816 258 aa5□□□□□ -1.61
SMG6-219ENST00000575663 ZIC4Q8N9L1 334 aa5□□□□□ -1.61
SMG6-219ENST00000575663 FAM71CQ8NEG0 241 aa5□□□□□ -1.61
SMG6-219ENST00000575663 OR52E2Q8NGJ4 325 aa5□□□□□ -1.61
SMG6-219ENST00000575663 OR5D16Q8NGK9 328 aa5□□□□□ -1.61
SMG6-219ENST00000575663 SFXN5Q8TD22 340 aa5□□□□□ -1.61
SMG6-219ENST00000575663 EPS8L3Q8TE67 593 aaKnown RBP5□□□□□ -1.61
SMG6-219ENST00000575663 MZB1Q8WU39 189 aa5□□□□□ -1.61
SMG6-219ENST00000575663 PPP1R14AQ96A00 147 aa5□□□□□ -1.61
SMG6-219ENST00000575663 MTERF3Q96E29 417 aa5□□□□□ -1.61
SMG6-219ENST00000575663 SLC47A1Q96FL8 570 aa5□□□□□ -1.61
SMG6-219ENST00000575663 THOC1Q96FV9 657 aaKnown RBP5□□□□□ -1.61
SMG6-219ENST00000575663 TSSK3Q96PN8 268 aa5□□□□□ -1.61
SMG6-219ENST00000575663 OR7D2Q96RA2 312 aa5□□□□□ -1.61
SMG6-219ENST00000575663 DIRC2Q96SL1 478 aa5□□□□□ -1.61
SMG6-219ENST00000575663 SDF2Q99470 211 aa5□□□□□ -1.61
SMG6-219ENST00000575663 ZNF350Q9GZX5 532 aa5□□□□□ -1.61
SMG6-219ENST00000575663 DENND2DQ9H6A0 471 aaPredicted RBP5□□□□□ -1.61
SMG6-219ENST00000575663 MID1IP1Q9NPA3 183 aa5□□□□□ -1.61
SMG6-219ENST00000575663 INTS9Q9NV88 658 aaKnown RBP5□□□□□ -1.61
SMG6-219ENST00000575663 EXD2Q9NVH0 621 aa5□□□□□ -1.61
SMG6-219ENST00000575663 ATAD3AQ9NVI7 634 aa5□□□□□ -1.61
SMG6-219ENST00000575663 GPATCH2Q9NW75 528 aa5□□□□□ -1.61
SMG6-219ENST00000575663 C1orf109Q9NX04 203 aa5□□□□□ -1.61
SMG6-219ENST00000575663 SLCO1C1Q9NYB5 712 aa5□□□□□ -1.61
SMG6-219ENST00000575663 C1RLQ9NZP8 487 aa5□□□□□ -1.61
SMG6-219ENST00000575663 TBK1Q9UHD2 729 aa5□□□□□ -1.61
SMG6-219ENST00000575663 RCE1Q9Y256 329 aa5□□□□□ -1.61
SMG6-219ENST00000575663 RASD1Q9Y272 281 aa5□□□□□ -1.61
SMG6-219ENST00000575663 CENPVL1A0A0U1RR11 272 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms