RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GXYLT1Q4G148 440 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 LIPNQ5VXI9 398 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 GSG1LQ6UXU4 331 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 RNF44Q7L0R7 432 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 SP7Q8TDD2 431 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 FAM3CQ92520 227 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 TSACCQ96A04 125 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 LAMP5Q9UJQ1 280 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 ING1Q9UK53 422 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 MKL2Q9ULH7 1088 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 H7C417 338 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 HOXD4P09016 255 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 PSG6Q00889 435 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 FLVCR1-AS1Q8TAF5 88 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 RPS4Y2Q8TD47 263 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 GPR148Q8TDV2 347 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 CCDC107Q8WV48 283 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 RIT1Q92963 219 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 Q96M85 177 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 LINC00052Q96N35 136 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 GPR174Q9BXC1 333 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 UPB1Q9UBR1 384 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 MTFP1Q9UDX5 166 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 STEAP1Q9UHE8 339 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 PCOLCE2Q9UKZ9 415 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 SERINC4A6NH21 518 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 GOSR2O14653 212 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 XRCC3O43542 346 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ADAM11O75078 769 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 RDH16O75452 317 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 MAS1P04201 325 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 CD14P08571 375 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 AKAIN1P0CW23 69 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF35P13682 527 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 GTF2F2P13984 249 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 SKP1P63208 163 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ITPRIPL2Q3MIP1 535 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 C2orf27AQ580R0 203 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 RGS7BPQ6MZT1 257 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 OR6M1Q8NGM8 313 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 BAHD1Q8TBE0 780 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ST8SIA4Q92187 359 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 RGP1Q92546 391 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ANKRD9Q96BM1 317 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 CCNL2Q96S94 520 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 CRISPLD2Q9H0B8 497 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ANKRD10Q9NXR5 420 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 CXXC1Q9P0U4 656 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 TMEM14AQ9Y6G1 99 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 A0A0J9YY10 115 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 POM121BA6NF01 834 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 CHURC1-FNTBB4DL54 471 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 NMBP08949 121 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 HOXC4P09017 264 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 HPGDP15428 266 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 CTXN1P60606 82 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 GPR18Q14330 331 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 C4orf46Q504U0 113 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 TMEM81Q6P7N7 255 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 NHLRC1Q6VVB1 395 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 OR2AK2Q8NG84 335 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 OR4N2Q8NGD1 307 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 OR52B4Q8NGK2 314 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 OR4C16Q8NGL9 310 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ZNRF4Q8WWF5 429 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 MNTQ99583 582 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 OPN4Q9UHM6 478 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 TMEM212A6NML5 194 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 RENP00797 406 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 PNMTP11086 282 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 AQP2P41181 271 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 CCR4P51679 360 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 OVCH2Q7RTZ1 564 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ZBTB44Q8NCP5 570 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 LSM14AQ8ND56 463 aaKnown RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 OR6N2Q8NGY6 317 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 CCL4L1Q8NHW4 92 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ZPLD1Q8TCW7 415 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 TSEN15Q8WW01 171 aaKnown RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 ASB13Q8WXK3 278 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 KLHL15Q96M94 604 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 EXO5Q9H790 373 aa9.82□□□□□ -0.84
CCDC40-207ENST00000572253 SRA1Q9HD15 236 aaKnown RBP9.82□□□□□ -0.84
CCDC40-207ENST00000572253 POM121CA8CG34 1229 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 CDC40O60508 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCDC40-207ENST00000572253 PRAMEF2O60811 474 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 SIX6O95475 246 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 APEHP13798 732 aaKnown RBP9.81□□□□□ -0.84
CCDC40-207ENST00000572253 ALG10Q5BKT4 473 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 ARMC6Q6NXE6 501 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 TSSK4Q6SA08 328 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-207ENST00000572253 CCDC74AQ96AQ1 378 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 GPX7Q96SL4 187 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-207ENST00000572253 SFXN1Q9H9B4 322 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 HRASLS2Q9NWW9 162 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 GRHPRQ9UBQ7 328 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 KCNMB2Q9Y691 235 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 APBB3O95704 486 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 IGKV1D-16P01601 117 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms