RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 A0A087WZY1 265 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 IGLV3-32A0A0A0MS00 114 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 IGHV1-18A0A0C4DH31 117 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 BBIP1A8MTZ0 92 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 K7EPI3 171 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 OR7A17O14581 309 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 PIP5K1BO14986 540 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 PLOD3O60568 738 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 FKBP6O75344 327 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 ENTPD5O75356 428 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 CIB2O75838 187 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 PSMG1O95456 288 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 OTCP00480 354 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 GBAP04062 536 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 ALDOCP09972 364 aaKnown RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 IDO1P14902 403 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 TSPAN8P19075 237 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 TCN1P20061 433 aaPredicted RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 NPR2P20594 1047 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 THBS4P35443 961 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 CLK3P49761 638 aaKnown RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 FOXA1P55317 472 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 MRPS35P82673 323 aaKnown RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 IRF8Q02556 426 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 MVKQ03426 396 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 C17orf67Q0P5P2 114 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 DDX39BQ13838 428 aaKnown RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 GTF2H2Q13888 395 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 KPNB1Q14974 876 aaKnown RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 TAF11Q15544 211 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 LTB4RQ15722 352 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 SPATS1Q496A3 300 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 NRN1LQ496H8 165 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 GGTA1PQ4G0N0 100 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 PDCD4Q53EL6 469 aaKnown RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 FBXO48Q5FWF7 155 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 AVPI1Q5T686 147 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 GTF2H2CQ6P1K8 395 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 GALNT18Q6P9A2 607 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 GPRIN3Q6ZVF9 776 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 FRA10AC1Q70Z53 315 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 GOLGA7Q7Z5G4 137 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 GALNT5Q7Z7M9 940 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 FUNDC1Q8IVP5 155 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 SLC44A2Q8IWA5 706 aaPredicted RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 WDFY1Q8IWB7 410 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 DEFB107AQ8IZN7 70 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 Q8N1Y9 231 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 POC1BQ8TC44 478 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 GATAD1Q8WUU5 269 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 SLC9A6Q92581 669 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 EXT2Q93063 718 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 RAB39BQ96DA2 213 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 RSRC1Q96IZ7 334 aaKnown RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 SERPINI1Q99574 410 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 CENPKQ9BS16 269 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 TMEM79Q9BSE2 394 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 THTPAQ9BU02 230 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 ZNF717Q9BY31 904 aaPredicted RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 MARCH7Q9H992 704 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 ANKRA2Q9H9E1 313 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 PALMDQ9NP74 551 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 SLC6A13Q9NSD5 602 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 ASB6Q9NWX5 421 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 ASIC5Q9NY37 505 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 STX18Q9P2W9 335 aaKnown RBP5.88□□□□□ -1.47
CHD3-213ENST00000571249 ABCG2Q9UNQ0 655 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 OR10H1Q9Y4A9 318 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 X6R8D5 127 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 MUC4Q99102 2169 aa5.88□□□□□ -1.47
CHD3-213ENST00000571249 A0A1W2PRB8 838 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 NCF1BA6NI72 391 aaPredicted RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 ZNF724A8MTY0 619 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 NCF1CA8MVU1 366 aaPredicted RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 C22orf46C9J442 243 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 FBP2O00757 339 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 ERAL1O75616 437 aaKnown RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 TIPRLO75663 272 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 STK16O75716 305 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 OR4F21O95013 312 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 ANGPTL1O95841 491 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 WNT11O96014 354 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 CHEK2O96017 543 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 CRYAAP02489 173 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 ATP1B1P05026 303 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 ITGA5P08648 1049 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 NCF1P14598 390 aaPredicted RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 PRPH2P23942 346 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 MSX2P35548 267 aaPredicted RBP5.87□□□□□ -1.47
CHD3-213ENST00000571249 BSGP35613 385 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 RFX3P48380 749 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 PRPS1P60891 318 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 LCN2P80188 198 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 MXRA7P84157 204 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 EMX2Q04743 252 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 CHIT1Q13231 466 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 CDK5R2Q13319 367 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 CUL3Q13618 768 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 E2F2Q14209 437 aa5.87□□□□□ -1.47
CHD3-213ENST00000571249 TMEM176BQ3YBM2 270 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms