RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CARM1Q86X55 608 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 UEVLDQ8IX04 471 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 MSRB3Q8IXL7 192 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 C20orf196Q8IYI0 205 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 TMEM123Q8N131 208 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 FAM169BQ8N8A8 192 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 PIK3C3Q8NEB9 887 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 BBS10Q8TAM1 723 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 UBASH3BQ8TF42 649 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 NEU4Q8WWR8 484 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLC38A4Q969I6 547 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 ANKRD27Q96NW4 1050 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF317Q96PQ6 595 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 MRPL37Q9BZE1 423 aaKnown RBP7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF442Q9H7R0 627 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 LPAR2Q9HBW0 351 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 BCL2L10Q9HD36 194 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 A4GALTQ9NPC4 353 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 SLC25A37Q9NYZ2 338 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 KLHL14Q9P2G3 628 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 TMEFF2Q9UIK5 374 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 CMAHPQ9Y471 501 aa7.43□□□□□ -1.22
CTDNEP1-203ENST00000570385 TRAV36DV7A0A075B6V5 113 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 A0A087WUJ7 227 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF99A8MXY4 864 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 OR2T1O43869 369 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 RGS9O75916 674 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 C8BP07358 591 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 HOXB1P14653 301 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 ETS2P15036 469 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 ITGA2P17301 1181 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 AHCYP23526 432 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 THBS2P35442 1172 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 ALDH3B1P43353 468 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 GIPRP48546 466 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 PTDSS1P48651 473 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 RGS8P57771 180 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 CDK6Q00534 326 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 PMS2P3Q13401 168 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 CAMK2DQ13557 499 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 MFSD13AQ14CX5 517 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 GSG1Q2KHT4 349 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 ALKBH6Q3KRA9 238 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 PAGE3Q5JUK9 113 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 GCNT6Q5T4J0 391 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 LIPNQ5VXI9 398 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 C6orf89Q6UWU4 347 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF813Q6ZN06 617 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 MSANTD1Q6ZTZ1 278 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 LRP11Q86VZ4 500 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF786Q8N393 782 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 GOLGA6L1Q8N7Z2 621 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 LINC01356Q8N9X3 169 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 OR6N1Q8NGY5 312 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 MOGAT1Q96PD6 335 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 OCEL1Q9H607 264 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 THUMPD1Q9NXG2 353 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 B3GNT2Q9NY97 397 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 NKIRAS1Q9NYS0 192 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 MYEF2Q9P2K5 600 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 REV1Q9UBZ9 1251 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 USP22Q9UPT9 525 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 POFUT2Q9Y2G5 429 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 NOX1Q9Y5S8 564 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 USH1CQ9Y6N9 552 aa7.42□□□□□ -1.22
CTDNEP1-203ENST00000570385 ZNF726A6NNF4 738 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 C11orf98E9PRG8 122 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 M0R233 179 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 WNT9BO14905 357 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 AKAP8O43823 692 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 TPST2O60704 377 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 HPXP02790 462 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 BGLAPP02818 100 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 TACSTD2P09758 323 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 ARAFP10398 606 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 NAT2P11245 290 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 BMP2P12643 396 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 HOXB9P17482 250 aaPredicted RBP7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 NR4A1P22736 598 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 PAX7P23759 505 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 COL8A2P25067 703 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 PRKAR1BP31321 381 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 CDH15P55291 814 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 STX1BP61266 288 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 NCALDP61601 193 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 FADDQ13158 208 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 RIN1Q13671 783 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 SCARB2Q14108 478 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 RAB39AQ14964 217 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 OR1Q1Q15612 314 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 TRMT5Q32P41 509 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 GKAP1Q5VSY0 366 aaPredicted RBP7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 REEP3Q6NUK4 255 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 ULK3Q6PHR2 472 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 DHRS4L2Q6PKH6 230 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 EPGNQ6UW88 154 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 THSD4Q6ZMP0 1018 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 NET1Q7Z628 596 aaPredicted RBP7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 FUNDC1Q8IVP5 155 aa7.41□□□□□ -1.22
CTDNEP1-203ENST00000570385 LSMEM1Q8N8F7 131 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms