RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 MAGED1Q9Y5V3 778 aaPredicted RBP11.4□□□□□ -0.58
CNOT1-220ENST00000569916 MAP1AP78559 2803 aaPredicted RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 ARPC4-TTLL3A0A0A6YYG9 625 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 SLC35F4A4IF30 521 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 C11orf98E9PRG8 122 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 SERPINI2O75830 405 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 WNT11O96014 354 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 MT-ND1P03886 318 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 ASAH2BP0C7U1 165 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 THRBP10828 461 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 FLNAP21333 2647 aaKnown RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 AHCYP23526 432 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 RBM34P42696 430 aaKnown RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 PRPS1P60891 318 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 PSME3P61289 254 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 RPS4XP62701 263 aaKnown RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 ARF1P84077 181 aaKnown RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 CEACAM16Q2WEN9 425 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 CARD17Q5XLA6 110 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 ANKRD16Q6P6B7 361 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 CBLL1Q75N03 491 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 PIGWQ7Z7B1 504 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 VTCN1Q7Z7D3 282 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 C20orf196Q8IYI0 205 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 GPR137CQ8N3F9 429 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 PFN4Q8NHR9 129 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 MAGEE2Q8TD90 523 aaPredicted RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 SMAP2Q8WU79 429 aaPredicted RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 LZICQ8WZA0 190 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF837Q96EG3 531 aaPredicted RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 RADILQ96JH8 1075 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 PRRC1Q96M27 445 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 CXorf56Q9H5V9 222 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 CRLF2Q9HC73 371 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF701Q9NV72 531 aaPredicted RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 TAS2R5Q9NYW4 299 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 CISD1Q9NZ45 108 aaKnown RBP11.39□□□□□ -0.59
CNOT1-220ENST00000569916 A4GNTQ9UNA3 340 aa11.39□□□□□ -0.59
CNOT1-220ENST00000569916 HEATR1Q9H583 2144 aaKnown RBP11.38□□□□□ -0.59
CNOT1-220ENST00000569916 A0A096LPE4 126 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 A0A1W2PPZ6 126 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 M0R3G1 203 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 OVOL3O00110 214 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 NDUFAB1O14561 156 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 DYNC1I1O14576 645 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 GSTA4O15217 222 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 ARHGEF9O43307 516 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 IGF2P01344 180 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 UMPSP11172 480 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 FUT4P22083 530 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 TUBA1BP68363 451 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 TUBA4AP68366 448 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 ZP4Q12836 540 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 CAMK2DQ13557 499 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 SLC22A25Q6T423 547 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 PRSS57Q6UWY2 283 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 B3GLCTQ6Y288 498 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 TUBA1AQ71U36 451 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 NANOGNBQ7Z5D8 188 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 TMEM239Q8WW34 195 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 LRR1Q96L50 414 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 KCTD14Q9BQ13 255 aaPredicted RBP11.38□□□□□ -0.59
CNOT1-220ENST00000569916 SPAG4Q9NPE6 437 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 C20orf141Q9NUB4 165 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 ARL2BPQ9Y2Y0 163 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 SNX13Q9Y5W8 968 aa11.38□□□□□ -0.59
CNOT1-220ENST00000569916 ARID1AO14497 2285 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 IGHV1-18A0A0C4DH31 117 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF99A8MXY4 864 aaPredicted RBP11.37□□□□□ -0.59
CNOT1-220ENST00000569916 E7EQL1 145 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 PIP5K1CO60331 668 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 SEC14L2O76054 403 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 OR7A10O76100 309 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 OR6A2O95222 327 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF682O95780 498 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 SERPINA1P01009 418 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 IFNW1P05000 195 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
CNOT1-220ENST00000569916 IFNGR1P15260 489 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 NCK1P16333 377 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 BIDP55957 195 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 UBE2NP61088 152 aaKnown RBP11.37□□□□□ -0.59
CNOT1-220ENST00000569916 ST3GAL3Q11203 375 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 IFI44LQ53G44 452 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 YTHDF3Q7Z739 585 aaKnown RBP11.37□□□□□ -0.59
CNOT1-220ENST00000569916 DTX2Q86UW9 622 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 OFCC1Q8IZS5 231 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 GEMIN6Q8WXD5 167 aaKnown RBP11.37□□□□□ -0.59
CNOT1-220ENST00000569916 SGTBQ96EQ0 304 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 HSH2DQ96JZ2 352 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 HS6ST2Q96MM7 605 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 SLC38A2Q96QD8 506 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 TRAF4Q9BUZ4 470 aaPredicted RBP11.37□□□□□ -0.59
CNOT1-220ENST00000569916 MAN2C1Q9NTJ4 1040 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 CRNNQ9UBG3 495 aaPredicted RBP11.37□□□□□ -0.59
CNOT1-220ENST00000569916 POU2F3Q9UKI9 436 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 MED31Q9Y3C7 131 aa11.37□□□□□ -0.59
CNOT1-220ENST00000569916 PLCE1Q9P212 2302 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF503-AS2A6NEH8 195 aa11.36□□□□□ -0.59
CNOT1-220ENST00000569916 ZNF726A6NNF4 738 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms