RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 OR4F15Q8NGB8 312 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 BBS10Q8TAM1 723 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 BCL2L2Q92843 193 aaPredicted RBP11.43□□□□□ -0.58
SPG7-221ENST00000569720 RCN3Q96D15 328 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 SORCS2Q96PQ0 1159 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 SPAG4Q9NPE6 437 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 CA10Q9NS85 328 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 KCNS2Q9ULS6 477 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 PRPF19Q9UMS4 504 aaKnown RBP11.43□□□□□ -0.58
SPG7-221ENST00000569720 A0A096LPE4 126 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 A0A1W2PPZ6 126 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 LOC390937A0A1W2PQ73 354 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 VWC2LB2RUY7 222 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 PHF1O43189 567 aaPredicted RBP11.42□□□□□ -0.58
SPG7-221ENST00000569720 AKAP8O43823 692 aaKnown RBP11.42□□□□□ -0.58
SPG7-221ENST00000569720 OR2T1O43869 369 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 SLC43A1O75387 559 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 UPK3AO75631 287 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 OR4A8P0C604 315 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 PNMTP11086 282 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 BMP2P12643 396 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 HOXB9P17482 250 aaPredicted RBP11.42□□□□□ -0.58
SPG7-221ENST00000569720 RPS5P46782 204 aaKnown RBP11.42□□□□□ -0.58
SPG7-221ENST00000569720 NUDT2P50583 147 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 CLDN17P56750 224 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 ROR2Q01974 943 aaKnown RBP11.42□□□□□ -0.58
SPG7-221ENST00000569720 NAAAQ02083 359 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 LGALS3BPQ08380 585 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 RBBP4Q09028 425 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 C1DQ13901 141 aaKnown RBP11.42□□□□□ -0.58
SPG7-221ENST00000569720 RGNQ15493 299 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 GTDC1Q4AE62 458 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 FAM166AQ6J272 317 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 NANOGP8Q6NSW7 305 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 ERICH5Q6P6B1 374 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 VHLLQ6RSH7 139 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 C5orf46Q6UWT4 87 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 POU5F2Q8N7G0 328 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 FAM169BQ8N8A8 192 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 ZNF540Q8NDQ6 660 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 OXGR1Q96P68 337 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 BTBD10Q9BSF8 475 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 RAB1BQ9H0U4 201 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 NANOGQ9H9S0 305 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 C12orf10Q9HB07 376 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 BCL2L10Q9HD36 194 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 A4GALTQ9NPC4 353 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 CRNNQ9UBG3 495 aaPredicted RBP11.42□□□□□ -0.58
SPG7-221ENST00000569720 RCE1Q9Y256 329 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 CHST2Q9Y4C5 530 aa11.42□□□□□ -0.58
SPG7-221ENST00000569720 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.41□□□□□ -0.581e-15■■■■■ 29.3
SPG7-221ENST00000569720 LOC100289279A0A1B0GTE1 492 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 FTCDNL1E5RQL4 147 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 RPL36A-HNRNPH2H7BZ11 118 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 GYG2O15488 501 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 ERCC1P07992 297 aaPredicted RBP11.41□□□□□ -0.58
SPG7-221ENST00000569720 CECR9P0C854 216 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 APEHP13798 732 aaKnown RBP11.41□□□□□ -0.58
SPG7-221ENST00000569720 HNF1AP20823 631 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 SLC6A2P23975 617 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 NR4A2P43354 598 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 PPOXP50336 477 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 PSME3P61289 254 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 TUBA1BP68363 451 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 TUBA4AP68366 448 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 ARF1P84077 181 aaKnown RBP11.41□□□□□ -0.58
SPG7-221ENST00000569720 IL1RL1Q01638 556 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 EFNB3Q15768 340 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 ZSCAN26Q16670 478 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 IQCCQ4KMZ1 466 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 SAMD4BQ5PRF9 694 aaKnown RBP11.41□□□□□ -0.58
SPG7-221ENST00000569720 TUBA1AQ71U36 451 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 LINGO2Q7L985 606 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 NET1Q7Z628 596 aaPredicted RBP11.41□□□□□ -0.58
SPG7-221ENST00000569720 KDM8Q8N371 416 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 GPR137CQ8N3F9 429 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 SLC38A4Q969I6 547 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 ECSITQ9BQ95 431 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 PTDSS2Q9BVG9 487 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 MUC13Q9H3R2 512 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 TMEM38AQ9H6F2 299 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 TAS2R1Q9NYW7 299 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 SELENONQ9NZV5 590 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 VAPAQ9P0L0 249 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 ABCD2Q9UBJ2 740 aa11.41□□□□□ -0.58
SPG7-221ENST00000569720 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.41□□□□□ -0.58
SPG7-221ENST00000569720 ZNF432O94892 652 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 IGKV3-15P01624 115 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 IGLV1-44P01699 117 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 NUDT7P0C024 238 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 ETS2P15036 469 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 CBR1P16152 277 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 SRD5A1P18405 259 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 PRKAR1BP31321 381 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 ARR3P36575 388 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 CAPZA2P47755 286 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 IDH3GP51553 393 aaPredicted RBP11.4□□□□□ -0.58
SPG7-221ENST00000569720 HOXC5Q00444 222 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 EGR4Q05215 589 aa11.4□□□□□ -0.58
SPG7-221ENST00000569720 MFSD13AQ14CX5 517 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms