RNA–Protein interactions for RNA: ENST00000569615.2

UTP4-215, Transcript of UTP4, small subunit processome component, human

TSL 3

Gene UTP4, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UTP4-215	ENST00000569615	GPR35	Q9HC97	309 aa		11.13	□□□□□ -0.63
UTP4-215	ENST00000569615	ZNF229	Q9UJW7	825 aa		11.13	□□□□□ -0.63
UTP4-215	ENST00000569615	SLC7A7	Q9UM01	511 aa		11.13	□□□□□ -0.63
UTP4-215	ENST00000569615	VPS13C	Q709C8	3753 aa		11.13	□□□□□ -0.63
UTP4-215	ENST00000569615	HEATR1	Q9H583	2144 aa	Known RBP	11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	ELOVL7	A1L3X0	281 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	TRIM64	A6NGJ6	449 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	TRIM64B	A6NI03	449 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	FAM220BP	B1ANY3	271 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615		E7EQL1	145 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	MS4A18	H0YCH9	400 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	FXYD1	O00168	92 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	PLPP3	O14495	311 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	TRAF3IP2	O43734	574 aa	Predicted RBP	11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	OR5F1	O95221	314 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	UMPS	P11172	480 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	ARR3	P36575	388 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	CDKN1A	P38936	164 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	GZMM	P51124	257 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	NUDT6	P53370	316 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	ARF1	P84077	181 aa	Known RBP	11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	CEACAM16	Q2WEN9	425 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	MS4A18	Q3C1V0	323 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	KRTAP21-3	Q3LHN1	58 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	CARM1	Q86X55	608 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	OR4F15	Q8NGB8	312 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	HOPX	Q9BPY8	73 aa	Predicted RBP	11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	CACNG6	Q9BXT2	260 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	ULBP2	Q9BZM5	246 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	NSRP1	Q9H0G5	558 aa	Known RBP	11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	GSX1	Q9H4S2	264 aa	Predicted RBP	11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	EFCAB1	Q9HAE3	211 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	SEC14L4	Q9UDX3	406 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	FBXL3	Q9UKT7	428 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	USP22	Q9UPT9	525 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615	POFUT2	Q9Y2G5	429 aa		11.12	□□□□□ -0.63
UTP4-215	ENST00000569615		A0A096LPE4	126 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615		A0A1W2PPZ6	126 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	SLC35F4	A4IF30	521 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615		M0R3G1	203 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	SMAD7	O15105	426 aa	Known RBP	11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	RNF13	O43567	381 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	CH25H	O95992	272 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	IGF2	P01344	180 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	CSF3	P09919	207 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	CBR1	P16152	277 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	KDELR2	P33947	212 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	CAPZA2	P47755	286 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	CSNK1A1	P48729	337 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	PPP2R2B	Q00005	443 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	SLC25A3	Q00325	362 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	LTB	Q06643	244 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	ZP4	Q12836	540 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	ZNF74	Q16587	644 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	LRRC23	Q53EV4	343 aa	Predicted RBP	11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	CGB2	Q6NT52	195 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	CLEC2A	Q6UVW9	174 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	DEF8	Q6ZN54	512 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	NANOGNB	Q7Z5D8	188 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	C20orf196	Q8IYI0	205 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	MICU2	Q8IYU8	434 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	TMEM123	Q8N131	208 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	CMTM5	Q96DZ9	223 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	ZNF583	Q96ND8	569 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	MOGAT1	Q96PD6	335 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	WFDC6	Q9BQY6	131 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	RHNO1	Q9BSD3	238 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	ZNF426	Q9BUY5	554 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	STX18	Q9P2W9	335 aa	Known RBP	11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	CRNN	Q9UBG3	495 aa	Predicted RBP	11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	MOK	Q9UQ07	419 aa		11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	NIPBL	Q6KC79	2804 aa	eCLIP	11.11	□□□□□ -0.63
UTP4-215	ENST00000569615	HIVEP2	P31629	2446 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	IGHV1-18	A0A0C4DH31	117 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615		A0A1W2PRG6	482 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	ATP6V1G2-DDX39B	F2Z307	99 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615		H7C417	338 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	GSTA4	O15217	222 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	SERPINI2	O75830	405 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	PDE5A	O76074	875 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	IGKV3-15	P01624	115 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	CD8A	P01732	235 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	MT-ND1	P03886	318 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	TP53	P04637	393 aa	Predicted RBP	11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	NR2C1	P13056	603 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	SNRPD2	P62316	118 aa	Known RBP	11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	LGALS3BP	Q08380	585 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	SPOCK1	Q08629	439 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	ST3GAL3	Q11203	375 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	TNK1	Q13470	666 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	CYBRD1	Q53TN4	286 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	CARD17	Q5XLA6	110 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	SLC35D2	Q76EJ3	337 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	RBM45	Q8IUH3	476 aa	Known RBP	11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	OR6X1	Q8NH79	312 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	ZNF566	Q969W8	418 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	RCN3	Q96D15	328 aa		11.1	□□□□□ -0.63
UTP4-215	ENST00000569615	EMC6	Q9BV81	110 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms