RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 BCO1Q9HAY6 547 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 FANCFQ9NPI8 374 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 TAS2R5Q9NYW4 299 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 SEC14L4Q9UDX3 406 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 ENOPH1Q9UHY7 261 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 OAZ3Q9UMX2 235 aa14.26□□□□□ -0.13
USB1-215ENST00000569252 NF1P21359 2839 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 IGKV3D-15A0A087WSY6 115 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 A0A0G2JNJ9 132 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 KDM4EB2RXH2 506 aaPredicted RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 ZNF814B7Z6K7 855 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 MCIDASD6RGH6 385 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 H3BN98 237 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 CDC42EP2O14613 210 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 FZD7O75084 574 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 SS18L1O75177 396 aaPredicted RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 KRT33AO76009 404 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 IL18BPO95998 194 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 BCL10O95999 233 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 GSSP48637 474 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 DAP3P51398 398 aaKnown RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 KRTAP10-9P60411 292 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 CTXN1P60606 82 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 POU3F1Q03052 451 aaPredicted RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 RPL18Q07020 188 aaKnown RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 CDSNQ15517 529 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 RFX4Q33E94 735 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 ABLIM2Q6H8Q1 611 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 ZNF770Q6IQ21 691 aaPredicted RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 SEM1Q6ZVN7 128 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 NCCRP1Q6ZVX7 275 aaPredicted RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 AAED1Q7RTV5 226 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 OR6K3Q8NGY3 331 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 FANK1Q8TC84 345 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 CA5BP1Q8WTZ4 195 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 CCDC120Q96HB5 630 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 RBM4BQ9BQ04 359 aaKnown RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 RBM4Q9BWF3 364 aaKnown RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 PIGMQ9H3S5 423 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 PAPOLBQ9NRJ5 636 aaKnown RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 KRT84Q9NSB2 600 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 STX18Q9P2W9 335 aaKnown RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 Q9UFV3 132 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 PROCRQ9UNN8 238 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 POFUT2Q9Y2G5 429 aa14.25□□□□□ -0.13
USB1-215ENST00000569252 RRP15Q9Y3B9 282 aaKnown RBP14.25□□□□□ -0.13
USB1-215ENST00000569252 MED12Q93074 2177 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 ZNF716A6NP11 495 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 PTP4A3O75365 173 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 SMNDC1O75940 238 aaKnown RBP eCLIP14.24□□□□□ -0.132e-6■■■■□ 22.6
USB1-215ENST00000569252 TOXO94900 526 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 F13BP05160 661 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 CDH2P19022 906 aaPredicted RBP14.24□□□□□ -0.13
USB1-215ENST00000569252 KLK2P20151 261 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 BMP5P22003 454 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 NOS3P29474 1203 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 CHRNB4P30926 498 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 SLC6A6P31641 620 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 P2RY4P51582 365 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 RPS6KA3P51812 740 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 CLDN17P56750 224 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 XKRXQ6PP77 449 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 ZBTB49Q6ZSB9 765 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 RASSF6Q6ZTQ3 369 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 SLC35D2Q76EJ3 337 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 LSRQ86X29 649 aaPredicted RBP14.24□□□□□ -0.13
USB1-215ENST00000569252 HS3ST5Q8IZT8 346 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 UBE2J2Q8N2K1 259 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 MOSPD2Q8NHP6 518 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 ADAD1Q96M93 576 aaKnown RBP14.24□□□□□ -0.13
USB1-215ENST00000569252 C12orf49Q9H741 205 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 GRHPRQ9UBQ7 328 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 UPB1Q9UBR1 384 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 SIGLEC7Q9Y286 467 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 FLVCR1Q9Y5Y0 555 aa14.24□□□□□ -0.13
USB1-215ENST00000569252 MED13LQ71F56 2210 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 OR6C65A6NJZ3 312 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 C19orf84I3L1E1 186 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 KLF4O43474 513 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 RAMP1O60894 148 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 IFNGR1P15260 489 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 POU1F1P28069 291 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 AGTR1P30556 359 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 UQCRC1P31930 480 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 FOXF2Q12947 444 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 TRIP10Q15642 601 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 NIPAL3Q6P499 406 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 CASP12Q6UXS9 341 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 CD300LDQ6UXZ3 194 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 DPY19L2P2Q6ZN68 376 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 CCDC71Q8IV32 467 aaPredicted RBP14.23□□□□□ -0.13
USB1-215ENST00000569252 MARVELD2Q8N4S9 558 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 TEX47Q8TBZ9 253 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 MAGEE2Q8TD90 523 aaPredicted RBP14.23□□□□□ -0.13
USB1-215ENST00000569252 APH1AQ96BI3 265 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 LURAP1Q96LR2 239 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 GPA33Q99795 319 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 CIB1Q99828 191 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 NIPSNAP1Q9BPW8 284 aa14.23□□□□□ -0.13
USB1-215ENST00000569252 IFT27Q9BW83 186 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms