RNA–Protein interactions for RNA: ENST00000569151.1

BBS4-216, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-216	ENST00000569151	PRSS16	Q9NQE7	514 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	TDP1	Q9NUW8	608 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	SIDT1	Q9NXL6	827 aa	Known RBP	4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	CRIM1	Q9NZV1	1036 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	PPP4R1L	Q9P1A2	415 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	B4GALT6	Q9UBX8	382 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	LSM7	Q9UK45	103 aa	Known RBP	4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	ERVK-19	Q9WJR5	959 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	SIGLEC7	Q9Y286	467 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	WIF1	Q9Y5W5	379 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	KPTN	Q9Y664	436 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	PLXNA2	O75051	1894 aa		4.21	□□□□□ -1.74
BBS4-216	ENST00000569151	PIKFYVE	Q9Y2I7	2098 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	TRBV5-7	A0A0A0MS05	114 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	TRAV20	A0A0B4J274	112 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151		A0A0B4J2A0	478 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	TRBV2	A0A0J9YWF9	115 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	MEGF11	A6BM72	1044 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	ANTXRL	A6NF34	631 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	TVP23A	A6NH52	213 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	OR2AG2	A6NM03	316 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CPSF4L	A6NMK7	179 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	COLCA2	A8K830	154 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CHURC1-FNTB	B4DL54	471 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151		E9PI62	339 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151		J3QLW9	94 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	SULT2B1	O00204	365 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CDC42EP2	O14613	210 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	DVL2	O14641	736 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	TAAR5	O14804	337 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	ARPC3	O15145	178 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	NUDT21	O43809	227 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	B4GALT3	O60512	393 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	SRPX2	O60687	465 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	SCGN	O76038	276 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	GJB5	O95377	273 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	TBX6	O95947	436 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CH25H	O95992	272 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	HOXC4	P09017	264 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	OR4E1	P0C645	316 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	PET100	P0DJ07	73 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	LYL1	P12980	280 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	APEH	P13798	732 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF19	P17023	458 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CSRP1	P21291	193 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CDK2	P24941	298 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	ABCD3	P28288	659 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CD52	P31358	61 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	NTF4	P34130	210 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	AHR	P35869	848 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	EIF2S3	P41091	472 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CASR	P41180	1078 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	PTGFR	P43088	359 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CX3CR1	P49238	355 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CAV2	P51636	162 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	NCBP2	P52298	156 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	LBX1	P52954	281 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	EPHB3	P54753	998 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	OR12D2	P58182	307 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	FXYD6P3	P58550	94 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	TAS2R31	P59538	309 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	ST8SIA6	P61647	398 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	RAB1A	P62820	205 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	SIM1	P81133	766 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	SERTAD2	Q14140	314 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	HABP2	Q14520	560 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	KCNAB1	Q14722	419 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	SMCO1	Q147U7	214 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	RHEB	Q15382	184 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	INPP5J	Q15735	1006 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	TAF12	Q16514	161 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	PCGF3	Q3KNV8	242 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151		Q499Y3	187 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	PRAMEF19	Q5SWL8	479 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	PHF19	Q5T6S3	580 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	PIP5KL1	Q5T9C9	394 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	TMEM244	Q5VVB8	128 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	MRM1	Q6IN84	353 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	RAB12	Q6IQ22	244 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	CDPF1	Q6NVV7	123 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	STEAP1B	Q6NZ63	245 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	ZCCHC12	Q6PEW1	402 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151		Q6ZS46	218 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	DPPA4	Q7L190	304 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	C16orf59	Q7L2K0	433 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	PRSS45	Q7RTY3	260 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	BAP18	Q8IXM2	172 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	SLC35F2	Q8IXU6	374 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	DND1	Q8IYX4	353 aa	Known RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	OR2L13	Q8N349	312 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	LILRB2	Q8N423	598 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	GALNT16	Q8N428	558 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	BMPER	Q8N8U9	685 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	OR1S2	Q8NGQ3	325 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	OR5J2	Q8NH18	312 aa		4.2	□□□□□ -1.74
BBS4-216	ENST00000569151	RXFP4	Q8TDU9	374 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms