RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ARGFXA6NJG6 315 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR2AG2A6NM03 316 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 E9PQ18 207 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 H0YL77 283 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 H3BMH7 237 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 TMX2-CTNND1H3BSU7 103 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 M0QX08 132 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SH2D1BO14796 132 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 LSM1O15116 133 aaKnown RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ALOX15BO15296 676 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 LRRTM2O43300 516 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 CALUO43852 315 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SAP30O75446 220 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 WBP4O75554 376 aaKnown RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 STK17BO94768 372 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 CD160O95971 181 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 FGF1P05230 155 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ALPIP09923 528 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 PNMTP11086 282 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SYT1P21579 422 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 NT5EP21589 574 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 PTBP1P26599 531 aaKnown RBP eCLIP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 CD1CP29017 333 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 GTF2H1P32780 548 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SYKP43405 635 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 CEBPDP49716 269 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 PAX9P55771 341 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 CARD18P57730 90 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 EIF3EP60228 445 aaKnown RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 LMO4P61968 165 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 RPS4XP62701 263 aaKnown RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 RPL23AP62750 156 aaKnown RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ENPEPQ07075 957 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 KLF5Q13887 457 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 DOC2AQ14183 400 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ELOCQ15369 112 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 PCK2Q16822 640 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 TATDN3Q17R31 274 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 HKDC1Q2TB90 917 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SNAI3Q3KNW1 292 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 KRT71Q3SY84 523 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ACSF3Q4G176 576 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 C14orf28Q4W4Y0 310 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 C2CD6Q53TS8 623 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 DCAF12Q5T6F0 453 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 PRAMEF5Q5TYX0 476 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 AADACL4Q5VUY2 407 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 PRAMEF6Q5VXH4 476 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SPECC1LQ69YQ0 1117 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 TTC19Q6DKK2 380 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 FAM199XQ6PEV8 388 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 LCLAT1Q6UWP7 414 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 DPY19L2P2Q6ZN68 376 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 DPY19L4Q7Z388 723 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 GOLGA7Q7Z5G4 137 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 KIAA1328Q86T90 577 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 GKN2Q86XP6 184 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 OFCC1Q8IZS5 231 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 LRRC75A-AS1Q8N1F1 130 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 TEX26Q8N6G2 289 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF557Q8N988 423 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 FBXL13Q8NEE6 735 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 NFAM1Q8NET5 270 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 BPIFCQ8NFQ6 507 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR9K2Q8NGE7 335 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR10G8Q8NGN5 311 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SLC22A8Q8TCC7 542 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SPRYD4Q8WW59 207 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 PIGCQ92535 297 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 PAGE5Q96GU1 130 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF486Q96H40 463 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SLC45A3Q96JT2 553 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 SERPINB11Q96P15 392 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 PANX1Q96RD7 426 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 RBM4BQ9BQ04 359 aaKnown RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ROPN1BQ9BZX4 212 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 EHD1Q9H4M9 534 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 FANCEQ9HB96 536 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNHIT6Q9NWK9 470 aaKnown RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 C1orf123Q9NWV4 160 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 DDIT4Q9NX09 232 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 RCOR3Q9P2K3 495 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 POMT2Q9UKY4 750 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 IFT52Q9Y366 437 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 OTOGQ6ZRI0 2925 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 CSMD1Q96PZ7 3565 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 MED13LQ71F56 2210 aa2.76□□□□□ -1.97
HMGB1P6-201ENST00000569046 ESPL1Q14674 2120 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 PIKFYVEQ9Y2I7 2098 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 LOC105371242A0A075B767 164 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 IGHV1OR21-1A0A087WYE8 117 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 TRBV4-1A0A0J9YWV2 114 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 A0A1W2PR80 420 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 LRRC30A6NM36 301 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 GOLGA8SH3BPF8 625 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 MKRN2OSH3BPM6 223 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 RNF13O43567 381 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 GLRA3O75311 464 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZMPSTE24O75844 475 aa2.75□□□□□ -1.97
HMGB1P6-201ENST00000569046 CDK2AP2O75956 126 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms