RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 MED29Q9NX70 200 aa12.72□□□□□ -0.37
USB1-214ENST00000568848 B3GNT2Q9NY97 397 aa12.72□□□□□ -0.37
USB1-214ENST00000568848 DUSP13Q9UII6 198 aa12.72□□□□□ -0.37
USB1-214ENST00000568848 GRIP1Q9Y3R0 1128 aa12.72□□□□□ -0.37
USB1-214ENST00000568848 IGKV1D-42A0A075B6H8 117 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 A0A1W2PPW3 197 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 LRRN3E7EW58 273 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 TMPRSS2O15393 492 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 FAM157BP0CG42 384 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 ZNF35P13682 527 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 ZNF14P17017 642 aaPredicted RBP12.71□□□□□ -0.37
USB1-214ENST00000568848 GRPRP30550 384 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 ARR3P36575 388 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 GIPRP48546 466 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 DEFA6Q01524 100 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 GLO1Q04760 184 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 STX3Q13277 289 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 C1DQ13901 141 aaKnown RBP12.71□□□□□ -0.37
USB1-214ENST00000568848 RAB39AQ14964 217 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 GSTA3Q16772 222 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 LIN52Q52LA3 116 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 ZNF311Q5JNZ3 666 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 LRRC34Q8IZ02 419 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 FAM169BQ8N8A8 192 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 SGMS2Q8NHU3 365 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 OIT3Q8WWZ8 545 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 RDH5Q92781 318 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 VPS33AQ96AX1 596 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 BTNL2Q9UIR0 455 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 RAP2CQ9Y3L5 183 aa12.71□□□□□ -0.37
USB1-214ENST00000568848 DSPPQ9NZW4 1301 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 A0A0A6YYJ9 748 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 ZNF99A8MXY4 864 aaPredicted RBP12.7□□□□□ -0.38
USB1-214ENST00000568848 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 RPL36A-HNRNPH2H7BZ11 118 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 TRIM77I1YAP6 450 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 PLPP2O43688 288 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 MPZL1O95297 269 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 PNPP00491 289 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 MYZAPP0CAP1 466 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 UQCRBP14927 111 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 ACHEP22303 614 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 HTR2AP28223 471 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 RPL14P50914 215 aaKnown RBP12.7□□□□□ -0.38
USB1-214ENST00000568848 ARFIP2P53365 341 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 SH3BGRP55822 239 aaPredicted RBP12.7□□□□□ -0.38
USB1-214ENST00000568848 WDR4P57081 412 aaKnown RBP12.7□□□□□ -0.38
USB1-214ENST00000568848 COPZ1P61923 177 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 CAMK2DQ13557 499 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 MFSD13AQ14CX5 517 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
USB1-214ENST00000568848 HHATQ5VTY9 493 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 ZNF813Q6ZN06 617 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 ZNF584Q8IVC4 421 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 MFSD8Q8NHS3 518 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 RNF217Q8TC41 542 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 MGARPQ8TDB4 240 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 SLC38A5Q8WUX1 472 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 ZFAND2BQ8WV99 257 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 MAL2Q969L2 176 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 TMEM19Q96HH6 336 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 OXGR1Q96P68 337 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 OR52E6Q96RD3 313 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 FBXO9Q9UK97 447 aaPredicted RBP12.7□□□□□ -0.38
USB1-214ENST00000568848 RCE1Q9Y256 329 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 NOTCH1P46531 2555 aa12.7□□□□□ -0.38
USB1-214ENST00000568848 TMEM120BA0PK00 339 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 MS4A18H0YCH9 400 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 VAMP5O95183 116 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 ARAFP10398 606 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 LBPP18428 481 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 GTF2E2P29084 291 aaKnown RBP12.69□□□□□ -0.38
USB1-214ENST00000568848 CRATP43155 626 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 CCL8P80075 99 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 BST1Q10588 318 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 GNA13Q14344 377 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 FXNQ16595 210 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 GSG1Q2KHT4 349 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 MS4A18Q3C1V0 323 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 BEND6Q5SZJ8 279 aaPredicted RBP12.69□□□□□ -0.38
USB1-214ENST00000568848 CROCCP2Q86T23 111 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 MIER2Q8N344 545 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 ZMYND19Q96E35 227 aaPredicted RBP12.69□□□□□ -0.38
USB1-214ENST00000568848 WFDC6Q9BQY6 131 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 PIF1Q9H611 641 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 WDR55Q9H6Y2 383 aaPredicted RBP12.69□□□□□ -0.38
USB1-214ENST00000568848 ZNF665Q9H7R5 613 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.69□□□□□ -0.38
USB1-214ENST00000568848 SOX21Q9Y651 276 aaPredicted RBP12.69□□□□□ -0.38
USB1-214ENST00000568848 VWFP04275 2813 aa12.69□□□□□ -0.38
USB1-214ENST00000568848 VSTM5A8MXK1 200 aa12.68□□□□□ -0.38
USB1-214ENST00000568848 DEAF1O75398 565 aaPredicted RBP12.68□□□□□ -0.38
USB1-214ENST00000568848 ERLIN1O75477 346 aa12.68□□□□□ -0.38
USB1-214ENST00000568848 TFP02787 698 aa12.68□□□□□ -0.38
USB1-214ENST00000568848 PCMT1P22061 227 aa12.68□□□□□ -0.38
USB1-214ENST00000568848 GLRXP35754 106 aa12.68□□□□□ -0.38
USB1-214ENST00000568848 MAP2K6P52564 334 aa12.68□□□□□ -0.38
USB1-214ENST00000568848 MAGOHP61326 146 aaKnown RBP12.68□□□□□ -0.38
USB1-214ENST00000568848 UBA52P62987 128 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms