RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ULK3Q6PHR2 472 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 HSD17B13Q7Z5P4 300 aaPredicted RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 S100A13Q99584 98 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 WDR77Q9BQA1 342 aaPredicted RBP10.03□□□□□ -0.8
PALB2-206ENST00000568219 ALG12Q9BV10 488 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 SGPP1Q9BX95 441 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 SLC23A2Q9UGH3 650 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 HS3ST2Q9Y278 367 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 CA5BQ9Y2D0 317 aa10.03□□□□□ -0.8
PALB2-206ENST00000568219 A0A1B0GWA3 101 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 PLSCR5A0PG75 271 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 HTR3BO95264 441 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 RAB28P51157 221 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 C9orf152Q5JTZ5 239 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 ZNF660Q6AZW8 331 aaPredicted RBP10.02□□□□□ -0.8
PALB2-206ENST00000568219 IL17RCQ8NAC3 791 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 OR4S1Q8NGB4 309 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 DTD2Q96FN9 168 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 MS4A4EQ96PG1 132 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 RRAGCQ9HB90 399 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 IL21RQ9HBE5 538 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 STARD5Q9NSY2 213 aa10.02□□□□□ -0.8
PALB2-206ENST00000568219 RGPD3A6NKT7 1758 aaPredicted RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 RGPD4Q7Z3J3 1758 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 TUBAL3A6NHL2 446 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 MANSC4A6NHS7 340 aaPredicted RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 ZFPL1O95159 310 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 TSPAN15O95858 294 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 HSD17B2P37059 387 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 ACTR1BP42025 376 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 ACTR1AP61163 376 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 SNRPNP63162 240 aaKnown RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 CSNK1G2P78368 415 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 SHC2P98077 582 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 IRF5Q13568 498 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 SMAD2Q15796 467 aaKnown RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 ZNF626Q68DY1 528 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 OR7E24Q6IFN5 339 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.02□□□□□ -0.81
PALB2-206ENST00000568219 PUSL1Q8N0Z8 303 aaKnown RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 METTL27Q8N6F8 245 aaPredicted RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 FAM71CQ8NEG0 241 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 OR14A16Q8NHC5 309 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 NUBPLQ8TB37 319 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 MRPS24Q96EL2 167 aaKnown RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 ALG14Q96F25 216 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 LYSMD1Q96S90 227 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 MYADMQ96S97 322 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 ZNF649Q9BS31 505 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 TINAGL1Q9GZM7 467 aaPredicted RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 GAREM1Q9H706 876 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 APMAPQ9HDC9 416 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 ZFP57Q9NU63 452 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 OR5V1Q9UGF6 321 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 ICKQ9UPZ9 632 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 SSC5DA1L4H1 1573 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 SNRPGP15A8MWD9 76 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 SULT1C2O00338 296 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 ADAMTS4O75173 837 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 CPMP14384 443 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 MGMTP16455 207 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 HOXD10P28358 340 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 RAG2P55895 527 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 H2BFSP57053 126 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 Q499Y3 187 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 MRM1Q6IN84 353 aaKnown RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 SLC35F3Q8IY50 421 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 OR7G2Q8NG99 324 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 OR1J2Q8NGS2 313 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 ELF4Q99607 663 aaPredicted RBP10.02□□□□□ -0.81
PALB2-206ENST00000568219 ANK1P16157 1881 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 SCN2AQ99250 2005 aa10.02□□□□□ -0.81
PALB2-206ENST00000568219 IGLV3-16A0A075B6K0 115 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 TMEM235A6NFC5 223 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 BCL6P41182 706 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 GLYATL3Q5SZD4 288 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 RNLSQ5VYX0 342 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 OVCH1Q7RTY7 1134 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 METTL21AQ8WXB1 218 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 ISOC2Q96AB3 205 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 PRSS16Q9NQE7 514 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 FBXO34Q9NWN3 711 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 ASH2LQ9UBL3 628 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 MIOXQ9UGB7 285 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 URGCP-MRPS24S4R325 110 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 TP53BP1Q12888 1972 aaPredicted RBP10.01□□□□□ -0.81
PALB2-206ENST00000568219 QSER1Q2KHR3 1735 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 TEX13DA0A0J9YY54 714 aaPredicted RBP10.01□□□□□ -0.81
PALB2-206ENST00000568219 SEC14L5O43304 696 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 GPRIN2O60269 458 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 CLEC3AO75596 197 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 AKR7A3O95154 331 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 RECKO95980 971 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 ADH1AP07327 375 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 FAM157BP0CG42 384 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 DAOP14920 347 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 FOSL2P15408 326 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 PRKAR1BP31321 381 aa10.01□□□□□ -0.81
PALB2-206ENST00000568219 ATP1B3P54709 279 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms