RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	DIRC2	Q96SL1	478 aa		11.62	□□□□□ -0.55
SMG1-213	ENST00000567737	ZNF350	Q9GZX5	532 aa		11.62	□□□□□ -0.55
SMG1-213	ENST00000567737	PRDM13	Q9H4Q3	707 aa		11.62	□□□□□ -0.55
SMG1-213	ENST00000567737	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.62	□□□□□ -0.55
SMG1-213	ENST00000567737	C1orf109	Q9NX04	203 aa		11.62	□□□□□ -0.55
SMG1-213	ENST00000567737	OR5V1	Q9UGF6	321 aa		11.62	□□□□□ -0.55
SMG1-213	ENST00000567737	RASD1	Q9Y272	281 aa		11.62	□□□□□ -0.55
SMG1-213	ENST00000567737	TENM3	Q9P273	2699 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	IGLV3-9	A0A075B6K5	115 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	SHOX2	O60902	331 aa	Predicted RBP	11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	MAK	P20794	623 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	PRPH2	P23942	346 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	PAX8	Q06710	450 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	MOG	Q16653	247 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	ARHGAP11B	Q3KRB8	267 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737		Q6YL49	198 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	C16orf62	Q7Z3J2	963 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	OR5AK3P	Q8NH89	298 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	OR5P2	Q8WZ92	322 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	SGCD	Q92629	289 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	ZNF75A	Q96N20	296 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	NOX4	Q9NPH5	578 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	BAIAP2L1	Q9UHR4	511 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737	FBXL3	Q9UKT7	428 aa		11.61	□□□□□ -0.55
SMG1-213	ENST00000567737		A8MXK9	166 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	AP3D1	O14617	1153 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	FAM157B	P0CG42	384 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	UQCRB	P14927	111 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	ZNF43	P17038	809 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	MATN1	P21941	496 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	ATP5F1	P24539	256 aa	Predicted RBP	11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	CXCR1	P25024	350 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	SLC6A9	P48067	706 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	GIPR	P48546	466 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	RPS26	P62854	115 aa	Known RBP	11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	KCNJ10	P78508	379 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	MRPS25	P82663	173 aa	Known RBP	11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	LSM12	Q3MHD2	195 aa	Known RBP	11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	FAM209A	Q5JX71	171 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	BTNL3	Q6UXE8	466 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	SLC22A9	Q8IVM8	553 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	KLHL36	Q8N4N3	616 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	SPIC	Q8N5J4	248 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	CPEB3	Q8NE35	698 aa	Known RBP	11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	PIK3C3	Q8NEB9	887 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	OR10S1	Q8NGN2	331 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	PSMA8	Q8TAA3	256 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	C11orf40	Q8WZ69	217 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	UPRT	Q96BW1	309 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	L3HYPDH	Q96EM0	354 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	HSH2D	Q96JZ2	352 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	ERP44	Q9BS26	406 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	KRTAP17-1	Q9BYP8	105 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	EXD2	Q9NVH0	621 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	WDR45	Q9Y484	360 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	NPTN	Q9Y639	398 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737	POMT1	Q9Y6A1	747 aa		11.6	□□□□□ -0.55
SMG1-213	ENST00000567737		M0R3G1	203 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	DHH	O43323	396 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	C6orf47	O95873	294 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	LCK	P06239	509 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	GSTA1	P08263	222 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	INHBA	P08476	426 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	SBK2	P0C263	348 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	OR8G3P	P0DMU2	310 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	ZNF250	P15622	560 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	DRD4	P21917	467 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	CD80	P33681	288 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	SOAT1	P35610	550 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	HPCAL1	P37235	193 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	PRKAA2	P54646	552 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	PLTP	P55058	493 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	SEC61A1	P61619	476 aa	Known RBP	11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	ETF1	P62495	437 aa	Known RBP	11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	RAB1A	P62820	205 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	RPL38	P63173	70 aa	Known RBP	11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	RBBP4	Q09028	425 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	CAMK2D	Q13557	499 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	ESCO2	Q56NI9	601 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	TYW3	Q6IPR3	259 aa	Known RBP	11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	LRRN1	Q6UXK5	716 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	BRD3OS	Q6XYD6	125 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	ZNF813	Q6ZN06	617 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	DYRK2	Q92630	601 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	FCRL1	Q96LA6	429 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	PRPF18	Q99633	342 aa	Known RBP	11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	PATZ1	Q9HBE1	687 aa	Known RBP	11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	NPHS2	Q9NP85	383 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	IL20RA	Q9UHF4	553 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	CCL27	Q9Y4X3	112 aa		11.59	□□□□□ -0.55
SMG1-213	ENST00000567737	CLDN24	A6NM45	220 aa		11.58	□□□□□ -0.56
SMG1-213	ENST00000567737		H3BQF6	201 aa		11.58	□□□□□ -0.56
SMG1-213	ENST00000567737	SLC28A1	O00337	649 aa		11.58	□□□□□ -0.56
SMG1-213	ENST00000567737	CFLAR	O15519	480 aa		11.58	□□□□□ -0.56
SMG1-213	ENST00000567737	UBOX5	O94941	541 aa		11.58	□□□□□ -0.56
SMG1-213	ENST00000567737	UBL3	O95164	117 aa		11.58	□□□□□ -0.56
SMG1-213	ENST00000567737	PHB	P35232	272 aa		11.58	□□□□□ -0.56

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