RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 HIPK4Q8NE63 616 aa24■■□□□ 1.43
UBFD1-206ENST00000566669 TMEM43Q9BTV4 400 aa24■■□□□ 1.43
UBFD1-206ENST00000566669 IGKV1D-42A0A075B6H8 117 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 A0A0B4J2E0 115 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 LOC100289279A0A1B0GTE1 492 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 A0A1B0GX12 115 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 PHF1O43189 567 aaPredicted RBP23.99■■□□□ 1.43
UBFD1-206ENST00000566669 MT-ATP6P00846 226 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 ZNF23P17027 643 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 CALCRP30988 508 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 TUBA1BP68363 451 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 TUBA4AP68366 448 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 BEND6Q5SZJ8 279 aaPredicted RBP23.99■■□□□ 1.43
UBFD1-206ENST00000566669 TUBA1AQ71U36 451 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 ARMC8Q8IUR7 673 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 MSRB3Q8IXL7 192 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 FOXN4Q96NZ1 517 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 MRPL39Q9NYK5 338 aaKnown RBP23.99■■□□□ 1.43
UBFD1-206ENST00000566669 VAPAQ9P0L0 249 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 SEC14L4Q9UDX3 406 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 ANGPT4Q9Y264 503 aa23.99■■□□□ 1.43
UBFD1-206ENST00000566669 TRBV5-3A0A0A0MS03 114 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 IGHV2OR16-5A0A0B4J2B6 119 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 hCG_2039718K7EN88 272 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 FMO6PO60774 539 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 SRD5A1P18405 259 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 GIFP27352 417 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 CAPZA2P47755 286 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 EVX1P49640 407 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 HGFACQ04756 655 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 PUDPQ08623 228 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 CARTPTQ16568 116 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 PXKQ7Z7A4 578 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 C20orf196Q8IYI0 205 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 RNF217Q8TC41 542 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 STON2Q8WXE9 905 aa23.98■■□□□ 1.43
UBFD1-206ENST00000566669 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.98■■□□□ 1.43
UBFD1-206ENST00000566669 ZNF726A6NNF4 738 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 THBS4P35443 961 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 YLPM1P49750 1951 aaKnown RBP23.97■■□□□ 1.43
UBFD1-206ENST00000566669 RBBP4Q09028 425 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 PMS2P3Q13401 168 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 DAG1Q14118 895 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 SQLEQ14534 574 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 OR1Q1Q15612 314 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 PHC2Q8IXK0 858 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 ANKS4BQ8N8V4 417 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 HPS1Q92902 700 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 DOK1Q99704 481 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 PRR14Q9BWN1 585 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 SLC52A3Q9NQ40 469 aa23.97■■□□□ 1.43
UBFD1-206ENST00000566669 MS4A18H0YCH9 400 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 M0R3G1 203 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 NPRL3Q12980 569 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 GSG1Q2KHT4 349 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 MS4A18Q3C1V0 323 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 PAGE3Q5JUK9 113 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 ZNF613Q6PF04 617 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 SPATA21Q7Z572 469 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 MDP1Q86V88 176 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 MSI2Q96DH6 328 aaKnown RBP23.96■■□□□ 1.43
UBFD1-206ENST00000566669 DYNLRB1Q9NP97 96 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 SLAMF8Q9P0V8 285 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 POFUT2Q9Y2G5 429 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 CMAHPQ9Y471 501 aa23.96■■□□□ 1.43
UBFD1-206ENST00000566669 TPST1O60507 370 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 BGLAPP02818 100 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 DAOP14920 347 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 CHN2P52757 468 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 AQP5P55064 265 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 RPS23P62266 143 aaKnown RBP23.95■■□□□ 1.42
UBFD1-206ENST00000566669 AGKQ53H12 422 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 SLC30A8Q8IWU4 369 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 ZNF786Q8N393 782 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 C11orf65Q8NCR3 313 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 BPESC1Q9GZL8 116 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 B3GNT2Q9NY97 397 aa23.95■■□□□ 1.42
UBFD1-206ENST00000566669 IGHV4-61A0A0C4DH41 118 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 STAMBPO95630 424 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 NR4A1P22736 598 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 IGFBP5P24593 272 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 SNTB2Q13425 540 aaKnown RBP23.94■■□□□ 1.42
UBFD1-206ENST00000566669 REP15Q6BDI9 236 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 ZNF813Q6ZN06 617 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 LSRQ86X29 649 aaPredicted RBP23.94■■□□□ 1.42
UBFD1-206ENST00000566669 C10orf53Q8N6V4 93 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 OR6N1Q8NGY5 312 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 CKAP2Q8WWK9 683 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 ZNF837Q96EG3 531 aaPredicted RBP23.94■■□□□ 1.42
UBFD1-206ENST00000566669 EBF4Q9BQW3 602 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 ULBP2Q9BZM5 246 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 MS4A5Q9H3V2 200 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 NOX3Q9HBY0 568 aa23.94■■□□□ 1.42
UBFD1-206ENST00000566669 LEF1Q9UJU2 399 aaPredicted RBP23.94■■□□□ 1.42
UBFD1-206ENST00000566669 SLC35F4A4IF30 521 aa23.93■■□□□ 1.42
UBFD1-206ENST00000566669 MFN2O95140 757 aa23.93■■□□□ 1.42
UBFD1-206ENST00000566669 CELA3BP08861 270 aa23.93■■□□□ 1.42
UBFD1-206ENST00000566669 ADRM1Q16186 407 aa23.93■■□□□ 1.42
UBFD1-206ENST00000566669 TRMT5Q32P41 509 aaKnown RBP23.93■■□□□ 1.42
UBFD1-206ENST00000566669 GLIPR1L2Q4G1C9 344 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms