RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ALG10Q5BKT4 473 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 VWA1Q6PCB0 445 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 CASP12Q6UXS9 341 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 ZNF620Q6ZNG0 422 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 GALNT5Q7Z7M9 940 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 HIPK1Q86Z02 1210 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 ZDHHC13Q8IUH4 622 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 SVOPLQ8N434 492 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 ATG16L2Q8NAA4 619 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 OR6K3Q8NGY3 331 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 MOSPD2Q8NHP6 518 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 ASB5Q8WWX0 329 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 NANOS1Q8WY41 292 aaKnown RBP10.19□□□□□ -0.78
KARS-207ENST00000566560 NRBF2Q96F24 287 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 DGCR6LQ9BY27 220 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 GABARAPL1Q9H0R8 117 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 C12orf49Q9H741 205 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 MCCC2Q9HCC0 563 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 TAS2R5Q9NYW4 299 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 OAZ3Q9UMX2 235 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 SIGLEC7Q9Y286 467 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 NOSIPQ9Y314 301 aaKnown RBP10.19□□□□□ -0.78
KARS-207ENST00000566560 NOX1Q9Y5S8 564 aa10.19□□□□□ -0.78
KARS-207ENST00000566560 MAGED1Q9Y5V3 778 aaPredicted RBP10.19□□□□□ -0.78
KARS-207ENST00000566560 HELZ2Q9BYK8 2649 aaKnown RBP10.19□□□□□ -0.78
KARS-207ENST00000566560 LRRK2Q5S007 2527 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 FREM1Q5H8C1 2179 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 LOC102725191A0A1B0GVB3 256 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 A0A1W2PRG6 482 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 FAM90A27PA6NNH2 459 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 EEF1E1-BLOC1S5C9J1V9 151 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 MCIDASD6RGH6 385 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 G3V2T6 193 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 MS4A18H0YCH9 400 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 EEF1E1O43324 174 aaKnown RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 SMNDC1O75940 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
KARS-207ENST00000566560 NDUFB2O95178 105 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 IL18BPO95998 194 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 GASTP01350 101 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 F13BP05160 661 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 TSPAN19P0C672 248 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 HLA-DOBP13765 273 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 GSTM3P21266 225 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 RPL4P36578 427 aaKnown RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 KIR2DL2P43627 348 aaPredicted RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 CLDN17P56750 224 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 ZP4Q12836 540 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 TOP3AQ13472 1001 aaPredicted RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 FHL1Q13642 323 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 MELKQ14680 651 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 MS4A18Q3C1V0 323 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 C11orf91Q3C1V1 193 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 CREB3L2Q70SY1 520 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 NUFIP2Q7Z417 695 aaKnown RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 PXKQ7Z7A4 578 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 IGFN1Q86VF2 1251 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 EPHX4Q8IUS5 362 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 RELL2Q8NC24 303 aaPredicted RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 OR52L1Q8NGH7 329 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 TMEM45BQ96B21 275 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 ZNF775Q96BV0 537 aaPredicted RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 ZNF837Q96EG3 531 aaPredicted RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 ZNF385AQ96PM9 386 aaKnown RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 TNFRSF13CQ96RJ3 184 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 FEVQ99581 238 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 NIPSNAP1Q9BPW8 284 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 POLDIP3Q9BY77 421 aaKnown RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 OR52D1Q9H346 318 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 ZNF556Q9HAH1 456 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 FANCFQ9NPI8 374 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 INIPQ9NRY2 104 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 ZNF629Q9UEG4 869 aaPredicted RBP10.18□□□□□ -0.78
KARS-207ENST00000566560 PROCRQ9UNN8 238 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 RCE1Q9Y256 329 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 CDH10Q9Y6N8 788 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 RELNP78509 3460 aa10.18□□□□□ -0.78
KARS-207ENST00000566560 FASNP49327 2511 aaKnown RBP10.17□□□□□ -0.78
KARS-207ENST00000566560 MRPL33O75394 65 aaKnown RBP10.17□□□□□ -0.78
KARS-207ENST00000566560 SOX14O95416 240 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 ANXA8P13928 327 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 ANPEPP15144 967 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 IFNGR1P15260 489 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 PRKACGP22612 351 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 SLC6A6P31641 620 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 DAP3P51398 398 aaKnown RBP10.17□□□□□ -0.78
KARS-207ENST00000566560 SLC25A35Q3KQZ1 300 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 RPL13AP3Q6NVV1 102 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 NIPAL3Q6P499 406 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 FAHD1Q6P587 224 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 SMARCD3Q6STE5 483 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 TFAP2EQ6VUC0 442 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 RASSF6Q6ZTQ3 369 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 SLC35D2Q76EJ3 337 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 AAED1Q7RTV5 226 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 HDDC2Q7Z4H3 204 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 BTLAQ7Z6A9 289 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 MRGPRGQ86SM5 289 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 STK32CQ86UX6 486 aa10.17□□□□□ -0.78
KARS-207ENST00000566560 LIX1LQ8IVB5 337 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms