RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 GSX2Q9BZM3 304 aa17.4■□□□□ 0.38
CMTM3-211ENST00000565922 POU2F3Q9UKI9 436 aa17.4■□□□□ 0.38
CMTM3-211ENST00000565922 HTR3EA5X5Y0 456 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 SHOX2O60902 331 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-211ENST00000565922 GMNNO75496 209 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 ZNF682O95780 498 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 RPS4XP62701 263 aaKnown RBP17.39■□□□□ 0.37
CMTM3-211ENST00000565922 LGALS3BPQ08380 585 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 ZP4Q12836 540 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 PIN1Q13526 163 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-211ENST00000565922 HIKESHIQ53FT3 197 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 SLC22A25Q6T423 547 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 PRSS57Q6UWY2 283 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 CBLL1Q75N03 491 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 PIGWQ7Z7B1 504 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 LILRB1Q8NHL6 650 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-211ENST00000565922 SMAP2Q8WU79 429 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-211ENST00000565922 TMEM239Q8WW34 195 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 IGFBPL1Q8WX77 278 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 FAM162AQ96A26 154 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 CISD1Q9NZ45 108 aaKnown RBP17.39■□□□□ 0.37
CMTM3-211ENST00000565922 RPS6KA6Q9UK32 745 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 LAMP3Q9UQV4 416 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 MED31Q9Y3C7 131 aa17.39■□□□□ 0.37
CMTM3-211ENST00000565922 HIVEP1P15822 2718 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 ARPC4-TTLL3A0A0A6YYG9 625 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 SLC35F4A4IF30 521 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 SHISA9B4DS77 424 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 C11orf98E9PRG8 122 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 RNF13O43567 381 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 SERPINI2O75830 405 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 ASAH2BP0C7U1 165 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 HLA-DOBP13765 273 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 PAX1P15863 534 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 IFI44LQ53G44 452 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 Q5PR19 223 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 LINGO2Q7L985 606 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 NKAIN4Q8IVV8 208 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 CCDC36Q8IYA8 594 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 PERPQ96FX8 193 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 TMUB1Q9BVT8 246 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 CRLF2Q9HC73 371 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 GPR35Q9HC97 309 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 MEPEQ9NQ76 525 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-211ENST00000565922 MED29Q9NX70 200 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 NDE1Q9NXR1 346 aa17.38■□□□□ 0.37
CMTM3-211ENST00000565922 PLCE1Q9P212 2302 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 ZNF99A8MXY4 864 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-211ENST00000565922 SERPINA1P01009 418 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 DANCRP0C864 163 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 PTH2RP49190 550 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 SLC25A3Q00325 362 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 FOXD4Q12950 439 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-211ENST00000565922 CEACAM16Q2WEN9 425 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 C3orf36Q3SXR2 165 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 FKBP9P1Q75LS8 142 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 C20orf196Q8IYI0 205 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 OFCC1Q8IZS5 231 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 OR6N1Q8NGY5 312 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 TMEM255BQ8WV15 326 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 BCL2L2Q92843 193 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-211ENST00000565922 SGTBQ96EQ0 304 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 TRMT61AQ96FX7 289 aaKnown RBP17.37■□□□□ 0.37
CMTM3-211ENST00000565922 KCNS3Q9BQ31 491 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 EMC6Q9BV81 110 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 ZNF701Q9NV72 531 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-211ENST00000565922 ADA2Q9NZK5 511 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 A4GNTQ9UNA3 340 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 ALPK2Q86TB3 2170 aa17.37■□□□□ 0.37
CMTM3-211ENST00000565922 M0R3G1 203 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 IFNGR1P15260 489 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 CSNK1A1P48729 337 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 UGT2B15P54855 530 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 BIDP55957 195 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 ARF1P84077 181 aaKnown RBP17.36■□□□□ 0.37
CMTM3-211ENST00000565922 CAMK2DQ13557 499 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 AGAP6Q5VW22 663 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 CARD17Q5XLA6 110 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 SLC35D2Q76EJ3 337 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 SLC46A3Q7Z3Q1 461 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 HDDC2Q7Z4H3 204 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 VTCN1Q7Z7D3 282 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 CYP4Z1Q86W10 505 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 PGAM4Q8N0Y7 254 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 ANKS4BQ8N8V4 417 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 WFDC11Q8NEX6 87 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 OR6X1Q8NH79 312 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 LIPHQ8WWY8 451 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 NEUROG1Q92886 237 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 GTPBP3Q969Y2 492 aaKnown RBP17.36■□□□□ 0.37
CMTM3-211ENST00000565922 TXNDC15Q96J42 360 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 HSH2DQ96JZ2 352 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 FNDC11Q9BVV2 318 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 C1QTNF6Q9BXI9 259 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 ULBP2Q9BZM5 246 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 GRIP2Q9C0E4 1043 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 TAS2R5Q9NYW4 299 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 GMPR2Q9P2T1 348 aaKnown RBP17.36■□□□□ 0.37
CMTM3-211ENST00000565922 TAGLN3Q9UI15 199 aa17.36■□□□□ 0.37
CMTM3-211ENST00000565922 A0A096LPE4 126 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms