RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ALG10BQ5I7T1 473 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 PAGE3Q5JUK9 113 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 AGBL2Q5U5Z8 902 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 FAM91A1Q658Y4 838 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 ULK3Q6PHR2 472 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 DHRS4L2Q6PKH6 230 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 BLOC1S3Q6QNY0 202 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 C5orf46Q6UWT4 87 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 CCDC36Q8IYA8 594 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 C20orf196Q8IYI0 205 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 CDK20Q8IZL9 346 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF786Q8N393 782 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 GPR137CQ8N3F9 429 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 ADPRHL1Q8NDY3 354 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 PIK3C3Q8NEB9 887 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 IL17RDQ8NFM7 739 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 OR6S1Q8NH40 331 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 NFKBIDQ8NI38 313 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 DNAJA4Q8WW22 397 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-213ENST00000565173 NEU4Q8WWR8 484 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-213ENST00000565173 TLCD1Q96CP7 247 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 C1orf159Q96HA4 380 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 TXNDC15Q96J42 360 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 LRR1Q96L50 414 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 ANKRD27Q96NW4 1050 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 EMC6Q9BV81 110 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 RAB1BQ9H0U4 201 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 IKZF5Q9H5V7 419 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 NOX3Q9HBY0 568 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF224Q9NZL3 707 aa7.41□□□□□ -1.22
CAPN3-213ENST00000565173 FBXO9Q9UK97 447 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-213ENST00000565173 SH3PXD2BA1X283 911 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 LYNX1G3V0Z9 82 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 M0R3G1 203 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 SASH3O75995 380 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 HLA-HP01893 362 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 ADRA2AP08913 450 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 LYNX1P0DP58 116 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF35P13682 527 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF14P17017 642 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-213ENST00000565173 NR4A1P22736 598 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 GTF2E2P29084 291 aaKnown RBP7.4□□□□□ -1.22
CAPN3-213ENST00000565173 AQP5P55064 265 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 CDK6Q00534 326 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 POU3F1Q03052 451 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-213ENST00000565173 C1DQ13901 141 aaKnown RBP7.4□□□□□ -1.22
CAPN3-213ENST00000565173 DAG1Q14118 895 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 TRIP10Q15642 601 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 CR1LQ2VPA4 569 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 TTMPQ5BVD1 217 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 KRT80Q6KB66 452 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 REEP3Q6NUK4 255 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 SPATA21Q7Z572 469 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 UEVLDQ8IX04 471 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 UBASH3BQ8TF42 649 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 HPS1Q92902 700 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 MS4A3Q96HJ5 214 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 ATP6V1G3Q96LB4 118 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 MOGAT1Q96PD6 335 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 RAD21L1Q9H4I0 556 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 TMEM38AQ9H6F2 299 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 CACYBPQ9HB71 228 aaKnown RBP7.4□□□□□ -1.22
CAPN3-213ENST00000565173 NKIRAS1Q9NYS0 192 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 VAPAQ9P0L0 249 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 RPS6KB2Q9UBS0 482 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 USH1CQ9Y6N9 552 aa7.4□□□□□ -1.22
CAPN3-213ENST00000565173 A0A0B4J2E0 115 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 A0A1B0GX12 115 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 VSTM5A8MXK1 200 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 C5orf58C9J3I9 102 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 LRRN3E7EW58 273 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 PLPP3O14495 311 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 TGDSO95455 350 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 GPX2P18283 190 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 EVX1P49640 407 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 IDH3AP50213 366 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 CHN2P52757 468 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 CDH12P55289 794 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 PIGFQ07326 219 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 NPRL3Q12980 569 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 SNTB2Q13425 540 aaKnown RBP7.39□□□□□ -1.23
CAPN3-213ENST00000565173 SQLEQ14534 574 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 MFSD13AQ14CX5 517 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 OR1Q1Q15612 314 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 ELFN2Q5R3F8 820 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 GCNT6Q5T4J0 391 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 CARD17Q5XLA6 110 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 DLEU7Q6UYE1 221 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 LINC00114Q6XXX2 140 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 WDR88Q6ZMY6 472 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 PXKQ7Z7A4 578 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 LRP11Q86VZ4 500 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 ZNF584Q8IVC4 421 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 SCAIQ8N9R8 606 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 LINC01356Q8N9X3 169 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 CKAP2Q8WWK9 683 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 MRPL24Q96A35 216 aaKnown RBP7.39□□□□□ -1.23
CAPN3-213ENST00000565173 SPDL1Q96EA4 605 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 SLC47A1Q96FL8 570 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 SNX18Q96RF0 628 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms