RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SLC46A3Q7Z3Q1 461 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 PXKQ7Z7A4 578 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 COMTD1Q86VU5 262 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 C10orf111Q8N326 155 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 MAGEB18Q96M61 343 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 ANKRD27Q96NW4 1050 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 PLK3Q9H4B4 646 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 MRGBPQ9NV56 204 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 NDUFAF1Q9Y375 327 aa13.04□□□□□ -0.32
SPG7-210ENST00000564409 ANGPT2O15123 496 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 GPRIN2O60269 458 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 ENTPD5O75356 428 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 BGLAPP02818 100 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 OR4A8P0C604 315 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 GZMKP49863 264 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 PUDPQ08623 228 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 PMS2P3Q13401 168 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 ADIPOQQ15848 244 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 CYP51A1Q16850 503 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 GLIPR1L2Q4G1C9 344 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 TTMPQ5BVD1 217 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 METTL21CQ5VZV1 264 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 HDXQ7Z353 690 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 DHDDSQ86SQ9 333 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 PATL1Q86TB9 770 aaKnown RBP13.03□□□□□ -0.32
SPG7-210ENST00000564409 C20orf196Q8IYI0 205 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 RNF217Q8TC41 542 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 CKAP2Q8WWK9 683 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 CGREF1Q99674 301 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 PIMREGQ9BSJ6 248 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 RAB1BQ9H0U4 201 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 VIPAS39Q9H9C1 493 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 LPAR3Q9UBY5 353 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 SEC14L4Q9UDX3 406 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 FBXL3Q9UKT7 428 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 COL6A5A8TX70 2615 aa13.03□□□□□ -0.32
SPG7-210ENST00000564409 ZNF726A6NNF4 738 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 VWC2LB2RUY7 222 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 CHP2O43745 196 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 AQP1P29972 269 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 IDH3GP51553 393 aaPredicted RBP13.02□□□□□ -0.33
SPG7-210ENST00000564409 CDH12P55289 794 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 LSM11P83369 360 aaKnown RBP eCLIP13.02□□□□□ -0.33
SPG7-210ENST00000564409 INTS11Q5TA45 600 aaKnown RBP13.02□□□□□ -0.33
SPG7-210ENST00000564409 NHLRC1Q6VVB1 395 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 LINC00114Q6XXX2 140 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 LSRQ86X29 649 aaPredicted RBP13.02□□□□□ -0.33
SPG7-210ENST00000564409 PTOV1Q86YD1 416 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 RASSF5Q8WWW0 418 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 NANOS1Q8WY41 292 aaKnown RBP13.02□□□□□ -0.33
SPG7-210ENST00000564409 HTRA1Q92743 480 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 SORCS2Q96PQ0 1159 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 KCNK17Q96T54 332 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 MCHR1Q99705 422 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 VRK1Q99986 396 aaPredicted RBP13.02□□□□□ -0.33
SPG7-210ENST00000564409 MALRD1Q5VYJ5 2156 aa13.02□□□□□ -0.33
SPG7-210ENST00000564409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.02□□□□□ -0.333e-9■■■■□ 21.2
SPG7-210ENST00000564409 IGHV2OR16-5A0A0B4J2B6 119 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 SLC35F4A4IF30 521 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 PLPP3O14495 311 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 TPST2O60704 377 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 HPRP00739 348 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 FAM157CP0CG43 387 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 NPR2P20594 1047 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 CALCRP30988 508 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 NR4A2P43354 598 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 POU3F1Q03052 451 aaPredicted RBP13.01□□□□□ -0.33
SPG7-210ENST00000564409 HGFACQ04756 655 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 C10orf53Q8N6V4 93 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 OR5J2Q8NH18 312 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 NEU4Q8WWR8 484 aaPredicted RBP13.01□□□□□ -0.33
SPG7-210ENST00000564409 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 MOGAT1Q96PD6 335 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 ARHGDIGQ99819 225 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 SLC19A3Q9BZV2 496 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 ZNF385DQ9H6B1 395 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 KAT8Q9H7Z6 458 aaKnown RBP13.01□□□□□ -0.33
SPG7-210ENST00000564409 ARGLU1Q9NWB6 273 aaPredicted RBP13.01□□□□□ -0.33
SPG7-210ENST00000564409 B3GNT2Q9NY97 397 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 POFUT2Q9Y2G5 429 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 SPEF1Q9Y4P9 236 aa13.01□□□□□ -0.33
SPG7-210ENST00000564409 M0QX08 132 aa13□□□□□ -0.33
SPG7-210ENST00000564409 M0R3G1 203 aa13□□□□□ -0.33
SPG7-210ENST00000564409 OR6A2O95222 327 aa13□□□□□ -0.33
SPG7-210ENST00000564409 CBLP22681 906 aa13□□□□□ -0.33
SPG7-210ENST00000564409 THBS2P35442 1172 aa13□□□□□ -0.33
SPG7-210ENST00000564409 CAPZA2P47755 286 aa13□□□□□ -0.33
SPG7-210ENST00000564409 EVX1P49640 407 aa13□□□□□ -0.33
SPG7-210ENST00000564409 TUBA1BP68363 451 aa13□□□□□ -0.33
SPG7-210ENST00000564409 TUBA4AP68366 448 aa13□□□□□ -0.33
SPG7-210ENST00000564409 ZP4Q12836 540 aa13□□□□□ -0.33
SPG7-210ENST00000564409 NFYCQ13952 458 aa13□□□□□ -0.33
SPG7-210ENST00000564409 DUSP7Q16829 419 aa13□□□□□ -0.33
SPG7-210ENST00000564409 GSG1Q2KHT4 349 aa13□□□□□ -0.33
SPG7-210ENST00000564409 TUBA1AQ71U36 451 aa13□□□□□ -0.33
SPG7-210ENST00000564409 MDP1Q86V88 176 aa13□□□□□ -0.33
SPG7-210ENST00000564409 SMYD1Q8NB12 490 aa13□□□□□ -0.33
SPG7-210ENST00000564409 OR6N1Q8NGY5 312 aa13□□□□□ -0.33
SPG7-210ENST00000564409 ZNF837Q96EG3 531 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms