RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 IRAK2O43187 625 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 KLF8O95600 359 aaPredicted RBP5.81□□□□□ -1.48
CLK3-212ENST00000563418 ITGA5P08648 1049 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 LAMP1P11279 417 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 SMPD1P17405 629 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 HMGCS2P54868 508 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 ZNF429Q86V71 674 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 CPXM2Q8N436 756 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 C11orf42Q8N5U0 333 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 OR11H7Q8NGC8 314 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 WDR83Q9BRX9 315 aaKnown RBP5.81□□□□□ -1.48
CLK3-212ENST00000563418 NICN1Q9BSH3 213 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 TBL1XR1Q9BZK7 514 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 ABHD16BQ9H3Z7 469 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 CCDC187A0A096LP49 1063 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 HSPB2A8KAH6 182 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 AQP7O14520 342 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 MSTNO14793 375 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 GPR37L1O60883 481 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 SLC35G4P0C7Q5 338 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 CTHP32929 405 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 AHRP35869 848 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 FAM3BP58499 235 aaPredicted RBP5.81□□□□□ -1.48
CLK3-212ENST00000563418 HSPB2Q16082 182 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 MPEG1Q2M385 716 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 MAJINQ3KP22 176 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 C4orf17Q53FE4 359 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 SYPL2Q5VXT5 272 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 SLC38A9Q8NBW4 561 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 OR4B1Q8NGF8 309 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 OR1S1Q8NH92 325 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 PHOSPHO2Q8TCD6 241 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 PSMF1Q92530 271 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 PSMG2Q969U7 264 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 PDLIM5Q96HC4 596 aaKnown RBP5.81□□□□□ -1.48
CLK3-212ENST00000563418 CLN5O75503 358 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 PCDH8O95206 1070 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 VTNP04004 478 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 SDC1P18827 310 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 CTXN3Q4LDR2 81 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 GLCCI1Q86VQ1 547 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 ZNF439Q8NDP4 499 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 PHOSPHO1Q8TCT1 267 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 MR1Q95460 341 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 TESQ9UGI8 421 aaKnown RBP5.81□□□□□ -1.48
CLK3-212ENST00000563418 CLEC3BP05452 202 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 KLK1P06870 262 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 HBQ1P09105 142 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 OR5H8P0DN80 308 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 DRAM2Q6UX65 266 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 Q6ZN92 141 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 GHSRQ92847 366 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 OR10C1Q96KK4 312 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 HHIPQ96QV1 700 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 NDUFAF3Q9BU61 184 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 ZNF286AQ9HBT8 521 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 SLC25A19Q9HC21 320 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 KCNIP2Q9NS61 270 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 COA4Q9NYJ1 87 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 SHROOM3Q8TF72 1996 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 A0A1B0GWJ7 208 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 TRDCB7Z8K6 153 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 C17orf112F2Z3M2 114 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 NME2P1O60361 137 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 XCR1P46094 333 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 BTNL3Q6UXE8 466 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 C6orf120Q7Z4R8 191 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 FAM181AQ8N9Y4 354 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 ATG4CQ96DT6 458 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 ZNF75AQ96N20 296 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 RSRP1Q9BUV0 290 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 ELOVL1Q9BW60 279 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 HCAR1Q9BXC0 346 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 TMEM9BQ9NQ34 198 aa5.81□□□□□ -1.48
CLK3-212ENST00000563418 PLEKHB1Q9UF11 243 aaPredicted RBP5.81□□□□□ -1.48
CLK3-212ENST00000563418 TRBV4-1A0A0J9YWV2 114 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 C17orf102A2RUQ5 167 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF814B7Z6K7 855 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 CTSHP09668 335 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 INSRRP14616 1297 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 KLRK1P26718 216 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OPRD1P41143 372 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF136P52737 540 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 CASP6P55212 293 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 AARDQ4LEZ3 155 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 PRSS36Q5K4E3 855 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 TMEM244Q5VVB8 128 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 LDLRAD3Q86YD5 345 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 OR4K15Q8NH41 348 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 R3HDM4Q96D70 268 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 CIB3Q96Q77 187 aaPredicted RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 ARHGDIGQ99819 225 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 MYOZ1Q9NP98 299 aaPredicted RBP5.8□□□□□ -1.48
CLK3-212ENST00000563418 PRDM7Q9NQW5 492 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 MARCH5Q9NX47 278 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 AK3Q9UIJ7 227 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 C7orf77A4D0Y5 90 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 ZNF724A8MTY0 619 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 FTCDNL1E5RQL4 147 aa5.8□□□□□ -1.48
CLK3-212ENST00000563418 G3V3Q6 166 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms