RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 EPGNQ6UW88 154 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 FUNDC1Q8IVP5 155 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ZNF786Q8N393 782 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 GOLGA6L1Q8N7Z2 621 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ADPRHL1Q8NDY3 354 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 DNAJA4Q8WW22 397 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CKAP2Q8WWK9 683 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SLC41A3Q96GZ6 507 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ANKRD27Q96NW4 1050 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 WFDC6Q9BQY6 131 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 EMC6Q9BV81 110 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 USP22Q9UPT9 525 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 USH1CQ9Y6N9 552 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 AKAP8O43823 692 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 HLA-HP01893 362 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 BGLAPP02818 100 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MRPL19P49406 292 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CHN2P52757 468 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 POU3F1Q03052 451 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 RIN1Q13671 783 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 DAG1Q14118 895 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TRIP10Q15642 601 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 GCNT6Q5T4J0 391 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 FAM91A1Q658Y4 838 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ULK3Q6PHR2 472 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NHLRC1Q6VVB1 395 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NET1Q7Z628 596 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 UEVLDQ8IX04 471 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CCDC36Q8IYA8 594 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 C20orf196Q8IYI0 205 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TLCD1Q96CP7 247 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MS4A3Q96HJ5 214 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ZNF75AQ96N20 296 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SNX18Q96RF0 628 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TPK1Q9H3S4 243 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 IKZF5Q9H5V7 419 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MED29Q9NX70 200 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NKIRAS1Q9NYS0 192 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 VAPAQ9P0L0 249 aa14.41□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 A0A087WUJ7 227 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TRBV5-3A0A0A0MS03 114 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 A0A0B4J2E0 115 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 A0A1B0GX12 115 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 VSTM5A8MXK1 200 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 LYNX1G3V0Z9 82 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TPST2O60704 377 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ERCC1P07992 297 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ADRA2AP08913 450 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 LYNX1P0DP58 116 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NQO1P15559 274 aaKnown RBP14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NR4A1P22736 598 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 APEX1P27695 318 aaKnown RBP14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CDK6Q00534 326 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 PAGE3Q5JUK9 113 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 REEP3Q6NUK4 255 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ZNF627Q7L945 461 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 IL17RDQ8NFM7 739 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 OR6S1Q8NH40 331 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 HPS1Q92902 700 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TXNDC15Q96J42 360 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MOGAT1Q96PD6 335 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 DYNLRB1Q9NP97 96 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SLC52A3Q9NQ40 469 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ZNF224Q9NZL3 707 aa14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TESQ9UGI8 421 aaKnown RBP14.4□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 LRRN3E7EW58 273 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CD79AP11912 226 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ZNF35P13682 527 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ZNF14P17017 642 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 AQP5P55064 265 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 PIGFQ07326 219 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SQLEQ14534 574 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 OR1Q1Q15612 314 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 GSG1Q2KHT4 349 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 BLOC1S3Q6QNY0 202 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 ZNF813Q6ZN06 617 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 KRT73Q86Y46 540 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SCAIQ8N9R8 606 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 RNF217Q8TC41 542 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 UBASH3BQ8TF42 649 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 MRPL24Q96A35 216 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SLC47A1Q96FL8 570 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 LRR1Q96L50 414 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SPATA5L1Q9BVQ7 753 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 MRPL37Q9BZE1 423 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 TCF7L2Q9NQB0 619 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CCDC167Q9P0B6 97 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CMAHPQ9Y471 501 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CORINQ9Y5Q5 1042 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 GMEB1Q9Y692 573 aa14.39□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 IFNGR1P15260 489 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 B4GALT1P15291 398 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 AQP1P29972 269 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CDH15P55291 814 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 RGS8P57771 180 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 STX1BP61266 288 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 NCALDP61601 193 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 CAMK2DQ13557 499 aa14.38□□□□□ -0.11
VPS9D1-AS1-201ENST00000562298 SCARB2Q14108 478 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms