RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 OR7D2Q96RA2 312 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 PANX1Q96RD7 426 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 SDF2Q99470 211 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 CCDC32Q9BV29 185 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 SLIRPQ9GZT3 109 aaKnown RBP6.14□□□□□ -1.43
SPG11-224ENST00000561268 HOXD1Q9GZZ0 328 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 SMURF2Q9HAU4 748 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 TPT1P8Q9HAU6 139 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 POLE3Q9NRF9 147 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 GLRX2Q9NS18 164 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 ELOVL5Q9NYP7 299 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 TRAPPC4Q9Y296 219 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 PEX16Q9Y5Y5 336 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 GPC6Q9Y625 555 aaPredicted RBP6.14□□□□□ -1.43
SPG11-224ENST00000561268 KCNE3Q9Y6H6 103 aa6.14□□□□□ -1.43
SPG11-224ENST00000561268 TLN2Q9Y4G6 2542 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 NPIPA5A0A0B4J1W7 369 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 CENPVL1A0A0U1RR11 272 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 EFCAB10A6NFE3 127 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 SHISA8B8ZZ34 492 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 C9JVG2 144 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 NPIPA7E9PJI5 369 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 EFNA2O43921 213 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 EIF4E2O60573 245 aaKnown RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 WBP4O75554 376 aaKnown RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 UGT2B17O75795 530 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 KRT75O95678 551 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 GSNP06396 782 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 CDK1P06493 297 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 TRAPPC2P0DI81 140 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 TRAPPC2BP0DI82 140 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 NPIPA8P0DM63 369 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 IL7RP16871 459 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 TCEA1P23193 301 aaKnown RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 HOXC12P31275 282 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 IDUAP35475 653 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 TGFBR2P37173 567 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 OPRL1P41146 370 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 RFX3P48380 749 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ZNF41P51814 821 aaPredicted RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 PRKAG1P54619 331 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 KCNJ10P78508 379 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 FAM27E3Q08E93 113 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 AQP6Q13520 282 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 IRF3Q14653 427 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 SPCS2Q15005 226 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 RGNQ15493 299 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 DEFB113Q30KQ7 82 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ARHGAP11BQ3KRB8 267 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ZIK1Q3SY52 487 aaPredicted RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 ZNF404Q494X3 552 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ATAD3BQ5T9A4 648 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 MEDAGQ5VYS4 303 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ABLIM2Q6H8Q1 611 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 OR4F3Q6IEY1 312 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 C3orf33Q6P1S2 294 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 BHLHB9Q6PI77 547 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 FRRS1Q6ZNA5 592 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 C22orf34Q6ZV56 151 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ZNF367Q7RTV3 350 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 SZRD1Q7Z422 152 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 P4HA3Q7Z4N8 544 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 KRT73Q86Y46 540 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 P3H2Q8IVL5 708 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 SCAIQ8N9R8 606 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 GATSQ8NAP1 163 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 OR5D16Q8NGK9 328 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 OR5M1Q8NGP8 315 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 OR5AK3PQ8NH89 298 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 GPR119Q8TDV5 335 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ADAMTS15Q8TE58 950 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ZFP90Q8TF47 636 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 GEMIN6Q8WXD5 167 aaKnown RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 ST8SIA1Q92185 356 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 CPNE4Q96A23 557 aaPredicted RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 TAMM41Q96BW9 452 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 NEURL3Q96EH8 262 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 SLC35G5Q96KT7 338 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 Q96MT0 163 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 PIP5K1AQ99755 562 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 YIPF4Q9BSR8 244 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 TRAF4Q9BUZ4 470 aaPredicted RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 NAA50Q9GZZ1 169 aaKnown RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 OPN3Q9H1Y3 402 aaPredicted RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 BCO1Q9HAY6 547 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 PLSCR4Q9NRQ2 329 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 RHBDL2Q9NX52 303 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 KIF17Q9P2E2 1029 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ING1Q9UK53 422 aaPredicted RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 STUB1Q9UNE7 303 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 USP22Q9UPT9 525 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 PLEKHA6Q9Y2H5 1048 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 SAMHD1Q9Y3Z3 626 aaKnown RBP6.13□□□□□ -1.43
SPG11-224ENST00000561268 DSPPQ9NZW4 1301 aa6.13□□□□□ -1.43
SPG11-224ENST00000561268 ZFHX3Q15911 3703 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 VPS13CQ709C8 3753 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 IRGMA1A4Y4 181 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 PRAMEF27A3QJZ7 478 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 SLC35F4A4IF30 521 aa6.12□□□□□ -1.43
SPG11-224ENST00000561268 DUXAA6NLW8 204 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms